Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1249 |
Symbol | |
ID | 4809754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1513511 |
End bp | 1514977 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640106672 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001037674 |
Protein GI | 125973764 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.917797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATG TAATAAGGGG AAAGCATTTT AATTACGTAC ACAATTTGTT GAAAAAAGAT GAGTTTGGGT TTGACAAGCC GAAAGAAGAG TGTGGAGTTT TCGGTATTTA CAGTAAAGGT AATTTGGATA CCGCACGTCT GACTTATTAT GCCCTTTATG CGCTTCAGCA CAGAGGACAG GAAAGTGCGG GAATTGCCGT CAACAATGGT GGGACACTTC TCTTTCACAA GGACATGGGG CTTGTTCCCG AGATTTTCAA TGAAAAAATT TTAAACAGTC TCAAAGGCAA AATTGCAATA GGACATGTGA GATATTCGAC TACCGGTGCG AGCAGCAGGG AAAACTCCCA GCCTATGGTT ATAAAGTACA AGAACGGACA GATGGCCATG GCTCATAACG GCAATCTTGT TAATGCCGCA AAGATAAGAG AAAAACTTGA GGAAGAGGGT ATTATATTCC AGTCGACTAT AGATTCCGAG GTAATTTTGA ATTTGATTTC AAGATTCAGG CTGACCAGCA ACAATATTGA AGAGGCCATT GTCAAGGTAA TGAAGGAGAT AAAAGGTGCG TATTCGCTGG TTATTCTCAC ACCAAACAAG CTTATTGGTA TCAGAGACCC TCACGGTATA AGACCGCTTT GCATCGGCCG TATAGATGAT TCCTATGTTC TTGCTTCAGA GACTTGCGCT CTTGATGCAG TAGATGCCGA ATATGTAAGA GATGTAAATC CCGGAGAGAT TATCGTTATT GAAGAGAGCG GAATGACTTC AATACAAACG GAAGTTCCGG AAAAGACGGC ACTTTGCATT TTTGAGTATA TTTACTTTGC AAGACCCGAC AGCTATATTG ACGGTGTAAG TGTTCACAGA GCGAGAATTG AGGCCGGAAG AAGGCTTGCC CGGGAGCATC CTGTGGAAGC CGACCTTGTT TTCGGAGTTC CGGATTCGGG TGTATCCGCG GCACTGGGTT ATTCCATGGA GTCGGGAATA CCTTATGATT TGGGACTTAT AAAAAACAAA TATATCGGAA GAACCTTTAT TCAGCCGGAA CAGGGACAGA GGGAAAGCGG AGTGAAAATT AAGCTTAATG CTTTGAAGGA AGCCGTTAAC GGTAAAAGGG TTGTTATGAT AGATGACTCA ATAGTCAGAG GTACTACCAG CAAGAGACTT GTTCAAATTT TAAGGGATGC CGGTGCGAAG GAAGTTCATA TGAGAATCAG CTCTCCGCCT TATATGTATC CATGTTTCTT TGGAGTTGAC ACATCGAGCA GGTCCCAGCT TATTGCGGCG GAATGTTCCG TTGAGGAAAT CAGAAAGATG ACAGGTGCGG ACAGCCTTGG GTACTTAAGT CTCGAAGGGC TCTTGAAAAC GCCGGTGGGA GCAAAATGCG GTTTTTGTAC CGGATGCTTC ACAGGCAAAT ATCCGATGGA AGTACCTAAA GATGCCAGCA AGTATAGTTG CGGGTAA
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Protein sequence | MFDVIRGKHF NYVHNLLKKD EFGFDKPKEE CGVFGIYSKG NLDTARLTYY ALYALQHRGQ ESAGIAVNNG GTLLFHKDMG LVPEIFNEKI LNSLKGKIAI GHVRYSTTGA SSRENSQPMV IKYKNGQMAM AHNGNLVNAA KIREKLEEEG IIFQSTIDSE VILNLISRFR LTSNNIEEAI VKVMKEIKGA YSLVILTPNK LIGIRDPHGI RPLCIGRIDD SYVLASETCA LDAVDAEYVR DVNPGEIIVI EESGMTSIQT EVPEKTALCI FEYIYFARPD SYIDGVSVHR ARIEAGRRLA REHPVEADLV FGVPDSGVSA ALGYSMESGI PYDLGLIKNK YIGRTFIQPE QGQRESGVKI KLNALKEAVN GKRVVMIDDS IVRGTTSKRL VQILRDAGAK EVHMRISSPP YMYPCFFGVD TSSRSQLIAA ECSVEEIRKM TGADSLGYLS LEGLLKTPVG AKCGFCTGCF TGKYPMEVPK DASKYSCG
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