Gene Cthe_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1075 
Symbol 
ID4811373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1282714 
End bp1283415 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content43% 
IMG OID640106497 
Producthypothetical protein 
Protein accessionYP_001037500 
Protein GI125973590 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CAAGAAATAT ATCAATTACC ATAATATGTA TTATATTGGG TATCATGTTG 
TCATGGCAGT ATAAAAGCAT CGAGAGCAAC AAAAGAGTGT CGGCAAGTCA GACAAAAAAC 
CTGTACGACC TTCAGAAAGA ACTTCTGGAG GAAAAAAAGA ACAACGAGAA TCTGCGTGCC 
AGAAACGAGG AATTGGAAAA ACAGTTGGCG CAGTATATCG ATGCGGCGGG AAACAATAAA 
CAGATTGAAG AAAGTATAAA AGAGCAGCTT ACAAGGGCCA GAATGCTTGC CGGTCTGGTT 
GATGTTCAGG GTCCCGGTGT TGAGATAGTT TTGGATGACG GAGAGTATGA TTATCAGAAA 
GTGTATGACA TTGACTTATT GAAACTCGTC AATGAGCTTA GAGCCGCAGA GGCGCAGGCC 
ATATCAATAA ACGGTGAACG CATTGTGGCG ATGACGGAGA TCAGATACGC GGATCCGTAC 
ATGGTTATAA ACGGAAGGCA AATATTCCCC CCATATGTTG TAAAAGCCAT TGCCGATCCG 
GAAAAACTTG ATTATGCGCT GAACATGCTG GGAGGCGTGG TGGAGATTTT CAGAGACAGT 
TTCGGATACA AAATCAGCAT CACCAAAGTG GACAAGATTA CGATACCAAA AGTCAGGGAC 
GACGGGTCGG TGTTAAAGTA CAACCTCCTT ACTCCGTTAT GA
 
Protein sequence
MKFSRNISIT IICIILGIML SWQYKSIESN KRVSASQTKN LYDLQKELLE EKKNNENLRA 
RNEELEKQLA QYIDAAGNNK QIEESIKEQL TRARMLAGLV DVQGPGVEIV LDDGEYDYQK 
VYDIDLLKLV NELRAAEAQA ISINGERIVA MTEIRYADPY MVINGRQIFP PYVVKAIADP 
EKLDYALNML GGVVEIFRDS FGYKISITKV DKITIPKVRD DGSVLKYNLL TPL