Gene Csal_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2398 
Symbol 
ID4026835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2688594 
End bp2690546 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content67% 
IMG OID637967600 
ProductABC transporter related 
Protein accessionYP_574444 
Protein GI92114516 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCTGT TACGTCTGGA ACAGGTGCAA CTGGCTTACG GCCCCCAGGT CCTGCTGGAT 
CATGCCGAAC TCACCTTGGA GAAAGGGGAG CGCTTGGCGC TGGTGGGGCG CAACGGAACG
GGCAAATCGA CGCTCCTCAA GCTGATCGCC GATGAGGCGG CGCCCGATGG CGGGCATATC
TGGCGCGCGC CGGGGCTCAA GGTGGGCGTG CTCGCCCAGG AACTGCCGGA AGCGAGCGGC
CGGACCATCT TCGACGTGGT CGCCCAGGGG CTGCCCGAGG CAGGGGCCTT GTTGAGCGAA
TATCATCACC TGGTGATGAG CGAGGCGCCC GACATGGCCG AACTCGAGCG CCTGCAGACC
CAGCTCGAGG CGGTGGACGG CTGGTCGTTT CATCAACGCA TCGACACCAT TCTGTCGCGG
CTCGGCCTGC CCGCCGACAC CGAGATAGTG AATCTCTCCG GCGGCTGGCG GCGGCGTGTG
GCCCTGGCCC GCGCGCTGGT GGCCGAGCCG GACGTGCTGC TGCTCGACGA GCCCACCAAC
CACCTCGACC TGGATACCAT CGGTTGGCTC GAGGAACAGT TGCTCGCCTT CAATGGCTCG
GTACTGTTCA TCACCCACGA CCGGGCGTTC CTGTCGCGGC TGGCGACCAG CATCCTGGAG
CTCGACCGTG GCCAGCTGGG GCGCTACCCC GGCGATTACG CGGCATACCA GGCACAGAAG
CAGCACGAGC TGGAAGTCGA GGCGCGCGAA CGCGCCGAGT TCGACAAGAA ACTCGCCAAG
GAAGAGGCCT GGATTCGCCA GGGCATCAAG GCGCGCCGGA CCCGTAACGA GGGCAGGGTG
CGGGCCCTCG AGAAGATGCG CGGCGAGCGC GCCGAGCGTC GGGAGCGCGT GGGCCGGGCT
CAGCTCAGCG TGGACAGCGG CGAGCGTACC GGCAAGCGGG TCGTCGAGCT TTCCGGCGTC
AGCCAGCGTT TCGGCGACGA CTGGGTGGTG CGCGACCTGT CGCTGGAGAT CCAGCGCGGC
GATCGCATCG GCTTCATCGG ACGCAACGGG GCCGGCAAGA CCACCCTGCT GAAGATCCTG
CTGGGCGAGC TGGCGCCCAC CGAGGGCAAG GTGCGCATGG GTACCAACCT GAGCGTGGCC
TACTTCGATC AGCTGCGTGC CGGGCTCGAG CTCGAGAAGA CCGTGTACGA CAACGTGGCG
CAGGGCAGCG ACCGCGTGCA GGTGGGCGGC AAGGACCGCC ACGTCATGAG CTACCTGCAG
GACTTCCTGT TCTCTCCCGA CCGGGTGCGC CAGCCGGTCA AGGCGCTCTC GGGCGGCGAA
TCCAATCGCT TGCTGCTGGC CAAGCTGTTC ACCCAGCCCG CTAACGTGCT GGTGCTCGAC
GAGCCGACCA ACGACCTGGA CGTCGAGACG CTGGAACTGC TCGAGGAACT GCTGCTCGAT
TTCGACGGCA CCCTGCTGCT GGTCTCGCAC GACCGTGCCT TCATGGACAA CGTGGTGACC
AGCGTGCTGG CCTTCGAGGG CGAGGGATAC GTTCGGGAGT ACGTCGGCGG GTACAGCGAC
TGGGTGCGTC AGGGCGGCAA GCTGCCGCCG GCGCCCGGGG AATTCGGCAA TGCCGCGAAC
GTGCTGCCGG CTCGCGAGGC CGAGCCGGCG CCGTCTGCGT CCACCCGCGC CGAGGCCGAC
AAGGCCACGA CCGCATCGGC CCCCGCCAAG CCCAAGCGGG CCAAGCTTTC CTACAAGCTG
CAACGCGAAC TGGACCAGTT GCCGGGGACC ATCGAGACGC TGGAAGCCGA AGTGGCGAGT
TTCGAAGCGG AAGTCGGCGC GCCCGAGTTC TATCAGCAGG ACGCCGAGAC CGTCACGCAG
CGTCTCGAGG CGCTGGCTGC CAAGCAGGAC GAGCTCGATG CGGCGATGTC ACGCTGGATG
GAACTGGAAG CCATGGCCGA GGGCGAGGAG TAG
 
Protein sequence
MTLLRLEQVQ LAYGPQVLLD HAELTLEKGE RLALVGRNGT GKSTLLKLIA DEAAPDGGHI 
WRAPGLKVGV LAQELPEASG RTIFDVVAQG LPEAGALLSE YHHLVMSEAP DMAELERLQT
QLEAVDGWSF HQRIDTILSR LGLPADTEIV NLSGGWRRRV ALARALVAEP DVLLLDEPTN
HLDLDTIGWL EEQLLAFNGS VLFITHDRAF LSRLATSILE LDRGQLGRYP GDYAAYQAQK
QHELEVEARE RAEFDKKLAK EEAWIRQGIK ARRTRNEGRV RALEKMRGER AERRERVGRA
QLSVDSGERT GKRVVELSGV SQRFGDDWVV RDLSLEIQRG DRIGFIGRNG AGKTTLLKIL
LGELAPTEGK VRMGTNLSVA YFDQLRAGLE LEKTVYDNVA QGSDRVQVGG KDRHVMSYLQ
DFLFSPDRVR QPVKALSGGE SNRLLLAKLF TQPANVLVLD EPTNDLDVET LELLEELLLD
FDGTLLLVSH DRAFMDNVVT SVLAFEGEGY VREYVGGYSD WVRQGGKLPP APGEFGNAAN
VLPAREAEPA PSASTRAEAD KATTASAPAK PKRAKLSYKL QRELDQLPGT IETLEAEVAS
FEAEVGAPEF YQQDAETVTQ RLEALAAKQD ELDAAMSRWM ELEAMAEGEE