Gene Csal_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1525 
Symbol 
ID4029227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1737249 
End bp1738145 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID637966714 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_573577 
Protein GI92113649 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.324742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCC TCAGCCTGCC GGCGCCCGCC AAGCTCAATC GCATGCTGCA TATCGTGGGC 
CGCCGTGCCG ACGGCTACCA CGAGCTGCAG ACACTGTTCC AGTTTCTCGA CCGGAGCGAC
ACGCTGCACT TCAGCCCCCG CGCTGACGGC GCCATTCACC TGGCCCCGGC CATCGCGGAC
GTCGATCACG ACGCCAACCT CATCGTGCGC GCCGCCCGTC TGCTGCAGCA CGCAAGCGGC
ACGCATCAGG GCGTGGACAT TCACCTCGAC AAACGGCTCC CCATGGGAGG CGGCCTGGGC
GGCGGCAGCT CCGACGCGGC CACCACCCTG CTCGCGCTCG ACCGCTTGTG GTCGCTCGAC
CTGGGGCTGC CCCGTCTCGC CGAGCTGGGT CTCACGCTCG GCGCCGACGT GCCGGTCTTC
GTGCGCGGGC ACAGCGCCTG GGCCGAAGGT ATCGGCGAAC GCCTTACGCC AGTGACGCTC
GACACCCCCT GGTTCGTGGT CATACACCCG GGCGAGGAAA TCGCCACGCC CGCCGTGTTC
GGGCACCCCG AATTGACACG CGACACCCCG CCGATTAGTA TGGCGCGCGC ACTGCGAGGG
GGAGCCGAAC AGGGGCGCGC CTGGCGCAAT GACTGCGAAG CCGTGGTGCG ACGCCTCTCG
CCGGACGTCG CACATGCGCT CGACTGGTTA TCGGCCTTCG GTCCGGCCAT GCTCACGGGA
ACGGGCAGTT GCCTTTTCTG TCCCTTGACG AGCGAACGGC AAGCCGATAG GATTTTGCGC
CGTGTTGGCA GCCACTGGCA TGCGTTCAAG GCACGCGGCT GCAACACTTC TCCCCTCCAT
GACGCTCTGG GCATTCACGA CGAATGGTCA CCCATGAGCC AATACGGGGA CGCCTGA
 
Protein sequence
MQRLSLPAPA KLNRMLHIVG RRADGYHELQ TLFQFLDRSD TLHFSPRADG AIHLAPAIAD 
VDHDANLIVR AARLLQHASG THQGVDIHLD KRLPMGGGLG GGSSDAATTL LALDRLWSLD
LGLPRLAELG LTLGADVPVF VRGHSAWAEG IGERLTPVTL DTPWFVVIHP GEEIATPAVF
GHPELTRDTP PISMARALRG GAEQGRAWRN DCEAVVRRLS PDVAHALDWL SAFGPAMLTG
TGSCLFCPLT SERQADRILR RVGSHWHAFK ARGCNTSPLH DALGIHDEWS PMSQYGDA