| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3434 |
|---|
| Symbol | |
|---|
| ID | 8359600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4279126 |
|---|
| End bp | 4280034 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644965607 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003123102 |
|---|
| Protein GI | 256422449 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0828133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.688204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA AAAATAATTT TGACGTAATC ATCATAGGCG GCAGTTATGC CGGATTAGCA
GCAGCGATGT CTTTGGGGCG TGCATTACGC AGGGTATTGA TTATTGATAG CGGGAAACCA
TGTAACAGAC AAACGCCGCA TTCACATAAC TTTCTGACAA GGGATGGCAG TACGCCTGCG
GAGATCGCAG CAATCGGGAA AGAACAGGTA CTGAAATATG ATACGGTGCA GTTCTATACC
GGATTGGCGA CACGCGGTGT GAAGACGGAA ACAGGATTTG AGATCGGTAC GGATAAGGGA
GATACTTTTT CCGGGACCAA ACTGATTTTT GCTACGGGGA TTACTGATGA ACAACCTGCT
ATTCCTGGTT TTGCGGAGTG TTGGGGGATA TCGGTGATAC ATTGTCCGTA TTGTCATGGC
TATGAGGTGA AACAGGAGAA AACGGGGATA CTGGCGAATG GCGATATGGC GTTTGATTTT
GGTAAACTTA TTTCCAACTG GACGGATGAA CTGACCATCT TTACCAATGG GGCATCTACA
CTGACACCGG AGCAGATGGA GAAACTGGCA CAGCATAATA TTGCGGTAGT GGAGAAAGTC
ATTACAAAGG TGGAACATGA TAAGGGGTAT GTACGTCAGC TTGTATTTGA AGATGGGCGT
ACCTTTGCGT TGAGGGCATT ATATGCCCGC GTTAACTTTA CGCAGCATTG CGATATCTCT
GTGCAGCTGG GTTGTGAACT GACTGAACAG GGATACCTGC GGGTGGATGC GATGCAAAAG
ACGACTGTTC CGCATGTTTA TGCATGTGGC GATAATAGCA GTATGATGCG TTCTGTAGCG
AATGCGGTAT CAACCGGCAC GCTTACGGGA GCGATCACTA ATAAGGATCT GATTGATGAG
TCGTTCTGA
|
|---|
| Protein sequence | MTGKNNFDVI IIGGSYAGLA AAMSLGRALR RVLIIDSGKP CNRQTPHSHN FLTRDGSTPA
EIAAIGKEQV LKYDTVQFYT GLATRGVKTE TGFEIGTDKG DTFSGTKLIF ATGITDEQPA
IPGFAECWGI SVIHCPYCHG YEVKQEKTGI LANGDMAFDF GKLISNWTDE LTIFTNGAST
LTPEQMEKLA QHNIAVVEKV ITKVEHDKGY VRQLVFEDGR TFALRALYAR VNFTQHCDIS
VQLGCELTEQ GYLRVDAMQK TTVPHVYACG DNSSMMRSVA NAVSTGTLTG AITNKDLIDE
SF
|
|---|
| |