| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0215 |
|---|
| Symbol | |
|---|
| ID | 8356315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 261383 |
|---|
| End bp | 261928 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644962357 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_003119916 |
|---|
| Protein GI | 256419263 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATT TTCTACCTAA CGGCCAGGTA TTGTTGGTGC GCCCGGCCAC ACTGGAAGAC
GCTCCAGCCC TGCTGGCATT GTACCAACAG TTGACCACAG AGACAGGTTT CCTGTTAATG
ACCCCACAGG AGTCGGCAGC GCTCACTGTC GCAGATGAAG AGGTATTTCT CCGCTCCTTC
TGCAATCGCC CGCAACACCT GATGTTGCTG GCGGAAACAG AAGGTCGCCT GGTTGGGAGT
ATTTCCATTA AACAATCCGG TTTCAGAAAA GAGAAACACC TGGGGCAACT GGGTATCGCT
GTGTTGCATG AATGCTGGAA TATGGGGATC GGCAGGCGAC TGATGACTGC CGGGATAAGA
TGGGCAGAAC AGCATGAAGA GCTGGAAATC ATACACTTTA ACGTGTTTGC AAATAATGAA
AGAGCTATTC AGTTGTATCG TAACTTTGGT TTTATGGAAT ATGGCCGTCT GCCGCAGGCA
TTTAAGCAGT CGGACGGTAC ATACGGAGAT TCAATATTTA TGTCAAAAAG GATAAAGAAC
GGATGA
|
|---|
| Protein sequence | MQHFLPNGQV LLVRPATLED APALLALYQQ LTTETGFLLM TPQESAALTV ADEEVFLRSF
CNRPQHLMLL AETEGRLVGS ISIKQSGFRK EKHLGQLGIA VLHECWNMGI GRRLMTAGIR
WAEQHEELEI IHFNVFANNE RAIQLYRNFG FMEYGRLPQA FKQSDGTYGD SIFMSKRIKN
G
|
|---|
| |