| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3651 |
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| Symbol | rplR |
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| ID | 5742675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4497615 |
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| End bp | 4497983 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294761 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001560737 |
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| Protein GI | 160881769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000455959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTAAGA AAGTTAATAA ATCAGAAGTT CGTATTAAAA AACACAATAG AATACGTAAT
CGTTTCTCCG GTACTCCTAC AAGACCACGT TTAGCTGTGT TTAGAAGTAA CAACCATATG
TACGCTCAGA TCATTGACGA TACAGTAGGA AATACCTTAG TTTCAGCTTC CACACTTGAA
AAAGGTGTAA AAGCAGAACT TGAGAAGACA AACGATGTTG CTGCAGCAGC AATGCTCGGT
ACTGTAATCG CTAAGAAAGC TCTTGAAAAA GGTATCACAA CTGTTGTTTT TGATAGAGGC
GGATTCATAT ATCAGGGTAA AGTTCAGGCA TTAGCAGAAG CAGCTAGAGA AGCTGGTCTT
AATTTCTAA
|
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| Protein sequence | MVKKVNKSEV RIKKHNRIRN RFSGTPTRPR LAVFRSNNHM YAQIIDDTVG NTLVSASTLE
KGVKAELEKT NDVAAAAMLG TVIAKKALEK GITTVVFDRG GFIYQGKVQA LAEAAREAGL
NF
|
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