| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3461 |
|---|
| Symbol | |
|---|
| ID | 5743573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4259366 |
|---|
| End bp | 4261840 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294573 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001560551 |
|---|
| Protein GI | 160881583 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.385513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATA GATTTACAGA AAATGCGAAA GAGGCAATCA ATCTAGCAAC CGATGTCGCT
TTCCGCTTAA TGCATAATTA TATAGGAACT GAACATCTAC TAATTGGATT GTTAAAGGCC
GACGGAGTTG CTTCTAAAGT GCTTGAAACA AACGGTGTAG AGGAAGATAA AGTGTTGGAA
TTAGTGAATC AATTAATTGC ACCTAACACA CCGATGAAAG TCGCAGGAAG TAATAATTTT
ACCAGCAGAG CAAGAGGAAT TTTGGAGCAA AGTGACAAAG AAGCGAAAAG AATGAATGCA
GAGCAAATTG GTACGGAGCA CATATTGATT GCTTTAATGA AGGAATCAGA CTGTATCGCA
ATACGATTAT TAAATACGCT CGGTATTAAT ATTCAAAAGC TTTACGTAGA TACTTTGGCT
GCTGCTGGAG TTGACATGAA TGCAGCAAAG AACGAATTTA GTAACGCAAA AGGAAAGGGC
AAGGGAAAGT CCTCTACCCC TACACTTGAT CAATATAGTA GAAATCTTAC GGAGTATGCA
AAAGAAGGAA AACTAGACCC AGTCATTGGT AGGGAAAATG AAATTAATCG TGTCATTCAA
ATCTTAAGCA GAAGAACGAA AAACAATCCA TGTTTGGTAG GAGAGCCTGG TGTTGGTAAA
ACTGCAATTG CAGAAGGATT AGCACTGAAA ATTGTGGAGG GTGATGTACC AGATACCATT
AAGGATAAAC GTGTCGTAAC CTTAGATTTA TCAGGTATGG TAGCTGGCTC TAAATACCGT
GGTGAATTTG AAGAACGTAT TAAGAAAGTA ATTGCAGAAG TTATCTATGA TGGAAATGTT
CTGCTATTTT TAGATGAATT ACACACCATT ATAGGTGCTG GTGGAGCAGA GGGTGCAATC
GATGCATCGA ATATATTAAA GCCATCCCTA GCTCGAGGAG AACTTCAATT AATCGGTGCG
ACTACGAGAG AGGAATATCG TAAGTATATT GAGAAGGATG CTGCATTAGA GCGTCGTTTC
CAACCGGTAG TCGTAGAGGA ACCATCCGAA GATGAAACCA TCAAAATTTT AATGGGTCTT
CGTTCAAGCT ATGAAAGTCA TCATAATGTA GTGATAACTG ATGATGCAGT AATTGCAGCA
GTAAAATTAT CAAAGAGATA TTTAAACGAC CGTTATCTAC CAGACAAAGC AATTGACCTT
ATGGATGAAG CTGCATCAAA AGTTCGATTA AGTACTTATG CGGTATCCCC AAAGATAAAG
CAGTTAGAGG AAAAGATTGC ACAGTTAGAA GCTGATAAAG AAGAAGCTAT TAAAGCGGAG
GCTTTTGAAA AAGCAAGTGA AATTAAGAAA AAGCAAGATA GAGCAAGAGA TACACTAAAT
CGTCAGAAGA TTGAGCATGA AAAGGCTAGG GAAGAGAATA AACTAATGGT AACTGAGGGC
GAAATTGCGG AGGTGATTTC GGGCTGGACC AAGATTCCGG TAAGAAAATT AGAAGAGGAA
GAAAGCGAAC GTCTCATGAA ATTGGAAGGA ATATTGCATG AACGTGTTGT GGGGCAGTCG
GAAGCGGTTT CTGCAGTTGC TAAGGCGATT CGCCGAGGCA GAGTAGGGCT AAAAGATCCG
AATCGCCCAA TTGGTTCCTT CTTATTCCTT GGACCAACTG GTGTAGGTAA AACAGAGCTT
AGCAAAGCAC TTGCGGAAGC GATGTTTGGA AGTGAGAATT CCATGATTCG AGTTGATATG
TCTGAATATA TGGAAAAGCA TAGTGTATCA AAGATGATTG GTTCTCCACC AGGATATGTT
GGATACGATG AGGGCGGTCA GTTAAGTGAG AAGGTACGCA GAAATCCATA TTCCGTTATA
TTATTTGATG AAATTGAGAA AGCACATCCA GATGTATTTA ACATTTTACT TCAGGTGTTG
GATGATGGTC ATATCACGGA TGCACAGGGA AGAAAAGTTA GCTTTAAGAA TACAATTATC
ATCATGACGT CAAATGCTGG TGCGCAAAGT ATTATTTCAC CAAAGAAGCT AGGCTTTACT
TCGGTAGTCG ATGAGAAGGC AGATTATAAT CGAATGAAGG AAGGCGTTAT GGATGAGGTA
AAACGAATCT TTAAGCCAGA GTTTATTAAT CGAATTGATG AAATTATTGT ATTCCATTCC
TTAACAAGAG AAGATATCAA GAACATTGTT CGGATTATGT TAGCAACCAT TGAAAAGCGC
TGCGAGCAAC AAATGGATTT AAAGCTTACG ATAGAAGAAA GTGTAATAGA TTTTATATCG
GAAAAAGGCT TTGATGATAA ATATGGTGCA AGACCAATCC GCCGTGCTAT ACAAAGTTAT
ATTGAAGATA AGTTGGCGGA AGAAATTTTA GAAGGTAAGG TAAGTTCGGG GGACTTTGTA
GCGGTCGATT ATAAAGAAAA TCAGATTGTG ATGACAGGGA AAAAGAAACG AACCAGAAAA
GCAAAAACAG AGTAA
|
|---|
| Protein sequence | MRDRFTENAK EAINLATDVA FRLMHNYIGT EHLLIGLLKA DGVASKVLET NGVEEDKVLE
LVNQLIAPNT PMKVAGSNNF TSRARGILEQ SDKEAKRMNA EQIGTEHILI ALMKESDCIA
IRLLNTLGIN IQKLYVDTLA AAGVDMNAAK NEFSNAKGKG KGKSSTPTLD QYSRNLTEYA
KEGKLDPVIG RENEINRVIQ ILSRRTKNNP CLVGEPGVGK TAIAEGLALK IVEGDVPDTI
KDKRVVTLDL SGMVAGSKYR GEFEERIKKV IAEVIYDGNV LLFLDELHTI IGAGGAEGAI
DASNILKPSL ARGELQLIGA TTREEYRKYI EKDAALERRF QPVVVEEPSE DETIKILMGL
RSSYESHHNV VITDDAVIAA VKLSKRYLND RYLPDKAIDL MDEAASKVRL STYAVSPKIK
QLEEKIAQLE ADKEEAIKAE AFEKASEIKK KQDRARDTLN RQKIEHEKAR EENKLMVTEG
EIAEVISGWT KIPVRKLEEE ESERLMKLEG ILHERVVGQS EAVSAVAKAI RRGRVGLKDP
NRPIGSFLFL GPTGVGKTEL SKALAEAMFG SENSMIRVDM SEYMEKHSVS KMIGSPPGYV
GYDEGGQLSE KVRRNPYSVI LFDEIEKAHP DVFNILLQVL DDGHITDAQG RKVSFKNTII
IMTSNAGAQS IISPKKLGFT SVVDEKADYN RMKEGVMDEV KRIFKPEFIN RIDEIIVFHS
LTREDIKNIV RIMLATIEKR CEQQMDLKLT IEESVIDFIS EKGFDDKYGA RPIRRAIQSY
IEDKLAEEIL EGKVSSGDFV AVDYKENQIV MTGKKKRTRK AKTE
|
|---|
| |