| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1044 |
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| Symbol | |
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| ID | 6374715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1127202 |
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| End bp | 1128242 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642683545 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001959466 |
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| Protein GI | 189499996 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC AGCAGGTAAA AAGCGAACAG GAAGAACAGG ACAGAGAACA TCAGGAACCG
AAAAAAATGA CGCTTCAGGT TGCACAGACC CAGAAACCGA TGCGTATCGA TGTCTATCTC
GCCCAGCAGG TTGAAAACGC CACCAGAAAC AAGGTTCAGG AAGCAATTTC GGAACACCGC
GTACGGGTTA ACGGAAAAAC CGTCAAAGCC AATTACAAGA TAAAATCTCT CGATTCCATA
GAGATCACCT TTCTCCGCCC TCCCGCACCG GAACTCGCTC CTGAAGATAT CCCCGTCGAC
ATCATCTATG AGGACAACGA TCTTATGGTA ATCAATAAAG CTCCCGGCAT GGTGGTCCAT
CCCGCATTCG GCAACTGGAC GGGAACGCTT GCCAACGCCA TCCTTCACCA TCTCGGCACG
GATGCAGAAA AACTCGATAC AACGGAATTA CGTCCCGGCA TCGTTCACCG GCTGGACAAA
AACACCTCGG GACTGATCAT TGTCGCCAAA CACGCTACGG CCCTGCACCG TCTGGCAAAA
CAGTTCGCGG AGCGTCAGGT CGAAAAAAAA TATCAGGCGA TTGTCTGGGG CGTTCCGGAG
CCTCCTGAAG GAATCGTCAA AACAAACATA GGCCGTTCGA TACGCGACCG TAAAGTAATG
ACCTCCTACG ATTTTGAAGG AAAGGAAGGA AAAACAGCGG TAACAGAGTA CCGTGTAGTG
GAAAACCTGC GCTATTTCTC ACTTGTCGAG ATGATCCTCC ACACAGGCCG AACGCATCAG
ATCAGAGTTC ACCTCAAACA TATAAACGCG CCTATTCTCG GAGACGAAAC CTATGGAGGG
GCCGGAGTAC AGTCCCTTCC CTTCAGCAAA AGCGAAAGCT TCGTCAAGAA CCTCCTGGAG
CGTATCCCGC GCCAGGCGCT CCACGCCGCG AGCCTGAGCT TTTTCCAGCC CACAACCCGA
GAAAGGATTA CCCTGTCAGC CCCACAGCCG GAAGATATGC AGGCGGCACT GGATAAGATT
AAAAGAATGT TGAACTGTTG A
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| Protein sequence | MQKQQVKSEQ EEQDREHQEP KKMTLQVAQT QKPMRIDVYL AQQVENATRN KVQEAISEHR
VRVNGKTVKA NYKIKSLDSI EITFLRPPAP ELAPEDIPVD IIYEDNDLMV INKAPGMVVH
PAFGNWTGTL ANAILHHLGT DAEKLDTTEL RPGIVHRLDK NTSGLIIVAK HATALHRLAK
QFAERQVEKK YQAIVWGVPE PPEGIVKTNI GRSIRDRKVM TSYDFEGKEG KTAVTEYRVV
ENLRYFSLVE MILHTGRTHQ IRVHLKHINA PILGDETYGG AGVQSLPFSK SESFVKNLLE
RIPRQALHAA SLSFFQPTTR ERITLSAPQP EDMQAALDKI KRMLNC
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