| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1580 |
|---|
| Symbol | |
|---|
| ID | 4569762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1796058 |
|---|
| End bp | 1796933 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639766162 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_912026 |
|---|
| Protein GI | 119357382 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000235294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG TGGTTCTTTT TTTGTTTACC AACCTTGCGG TGATGCTGGT GTTGTCGGTC
AGTGCCCGTG TTCTGGGCGT AGACCGATTT TTGACCGGCA ACGGTCTGGA TATGGGCATG
CTGCTTCTGT TTGCTGCTTT AATCGGTTTT GGCGGATCCT TTATTTCTCT TCTGATGTCC
AAAACCATGG CGAAATGGAG TACCGGCGCA CGGGTTATCC AGCAACCCGC CAACCAGAAC
GAGGTATGGC TCGTTGATAC CGTGAGTCAG CTTTCCAAAA AAGCCGGTTT GGCGATGCCC
GAGGTGGCCA TCTACGACGG TGCTCCGAAT GCCTTCGCCA CAGGCCCCAG CAAGTCGAGA
TCGCTGGTGG CGGTCTCGAC CGGACTGTTG CAGAGCATGG ATCGAAAACA GGTGGAAGCC
GTGTTGGCTC ACGAGGTCGC CCACATCGAT AACGGCGACA TGGTTACCTT GACGCTGATA
CAGGGTGTGC TCAATACCTT CGTGATTTTT CTGTCGCGCG TCATTGCCTA TGCTATTGAC
AGCTTTCTTC GCAGCGACGA CGACGAGTCC GGCAGTCCGG GTATCGGCTA CTGGATCAGC
AGCATTATTT TTGAAATCAT GTTCGGCATT CTGGCAAGCG TCGTCGTCAT GTACTTTTCT
CGCAAGCGTG AGTATCGGGC CGACGCGGGA GCTGCTGTGC TGTTGGGCGA CCGGCGCCCG
ATGATCGACG CCCTGCGAGC GCTGGGAGGT CTTCAGGCCG GCCAGTTGCC GAAGGAAATG
GCTGCCAGCG GGATTGCGGG TGGCGGTATG ATGGCTCTTT TCAGCAGTCA CCCGCCCCTT
GAATCGCGGA TTGCAGCGCT GGAATCGGCA CGCTGA
|
|---|
| Protein sequence | MKRVVLFLFT NLAVMLVLSV SARVLGVDRF LTGNGLDMGM LLLFAALIGF GGSFISLLMS
KTMAKWSTGA RVIQQPANQN EVWLVDTVSQ LSKKAGLAMP EVAIYDGAPN AFATGPSKSR
SLVAVSTGLL QSMDRKQVEA VLAHEVAHID NGDMVTLTLI QGVLNTFVIF LSRVIAYAID
SFLRSDDDES GSPGIGYWIS SIIFEIMFGI LASVVVMYFS RKREYRADAG AAVLLGDRRP
MIDALRALGG LQAGQLPKEM AASGIAGGGM MALFSSHPPL ESRIAALESA R
|
|---|
| |