| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1160 |
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| Symbol | |
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| ID | 4570737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 1307084 |
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| End bp | 1308421 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639765753 |
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| Product | nodulation efficiency protein NfeD |
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| Protein accession | YP_911621 |
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| Protein GI | 119356977 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00735841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTA TTGGACGAAT ACGATGGAGC AGAGTGTTTG CCGTGCGTTT TTTTTTCATT
GCTGTCGTAT CGGCAATCGC TTTGATTTCT TCTCCTGCCG ATGGCGCCGA AAACCTTGTA
TCGAGAATCG TGCTTAAGGG GTCGGTTAAT CCCGGCAGCG CAGGTTTTTT TTCGAGGGCA
CTTCATGATG CCCGCCGATC CGGCTCCGAT GCCGTGCTTG TGGAGCTGGA TACGCCCGGA
GGTCTGGTGA GCTCTCTCCG TTCCATGGTG CAGGAGATCA TGGCATCTCC GATACCGGTG
ATCGTGTACG TCTATCCTTC GGGTGCCCAG GCGGCATCAG CAGGAGCCCT CCTGATGCTT
TCGGCGCATG TTGCGGCAAT GGCTCCTGGA ACGGAGATCG GCGCGGCTCA TCCCGTGGGT
GCAGGAGGAA AGAGCGACGG GGATGAAACG ATGAAAAAGA AAGTGGTGAA TGATCTTGCT
GCGTTTGCCC GGAGTCTTGC GGAAAAACGG GGACGAAATG CACAGTGGGC TGAAAAAGCC
GTAACGGAGA GTGTTTCATC GACAGCGCAG GAGGCACTGC AGGCAGGCGT TATCGATATG
ATTTCGGATA ATCCGTCGGA GGTGCTGAGC CGGTTGCGTG GAATGAAAAT AATGACCGTT
GCCGGAGAAA AGGGGTTCAC AGGAGCTTCC TTTACCATTC GGGAGATCAG GCCCACGTTC
AAGGAGTCGG CGCTCATGAC TATCGCTGAT CCCAATCTGT CCTATATTTT ATTTCTTGCC
GGCATAGCAG GGCTTTACTT TGAACTGGCT ACTCCAGGTG CGATTTTTCC GGGCGTGGCC
GGTGCGATTT CGCTGTTACT CGGTTTATAT TCGATGCAGA CGCTCTCGGT AAATGTGACC
GGCCTGCTTC TTCTTCTGCT TGCCGTTCTG TTTCTTGGTC TCGAACTGTT TGTTACCAGC
GGCGGGATTC TTGCCGTCGC AGGCCTTGTT GCGCTTTTTG CAGGATCAAT CATGCTTTTC
GATCTGCCTG GTTCGGGAAT CACGCTTTCA CTTCAGGTGA TTCTGCCTGT TTTTGTCCTG
TTTTCCATTG GTATCGCGCT TCTTTTACGG GTGGTTTTCA GGTCCGGAAA GGAGCCTCCT
CTCATGGGAA AGAGCGCTCT CATCGGTCAG AGCGGGCGCG TTGTGCGGTT TATTGAAACG
GATAAGCCGG GTAAGGTATT TGTTCATGGA GAGCTATGGG ATGCTTCATC TTCGGAATGC
ATCGTTGAGG AAACCGTTGT TGTCGTTACT GGTATAGAGG GAATGGAATT GAAGGTTAAA
ACAAAACAAA AGGAATAA
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| Protein sequence | MMVIGRIRWS RVFAVRFFFI AVVSAIALIS SPADGAENLV SRIVLKGSVN PGSAGFFSRA
LHDARRSGSD AVLVELDTPG GLVSSLRSMV QEIMASPIPV IVYVYPSGAQ AASAGALLML
SAHVAAMAPG TEIGAAHPVG AGGKSDGDET MKKKVVNDLA AFARSLAEKR GRNAQWAEKA
VTESVSSTAQ EALQAGVIDM ISDNPSEVLS RLRGMKIMTV AGEKGFTGAS FTIREIRPTF
KESALMTIAD PNLSYILFLA GIAGLYFELA TPGAIFPGVA GAISLLLGLY SMQTLSVNVT
GLLLLLLAVL FLGLELFVTS GGILAVAGLV ALFAGSIMLF DLPGSGITLS LQVILPVFVL
FSIGIALLLR VVFRSGKEPP LMGKSALIGQ SGRVVRFIET DKPGKVFVHG ELWDASSSEC
IVEETVVVVT GIEGMELKVK TKQKE
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