| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0230 |
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| Symbol | rplA |
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| ID | 4570797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 254677 |
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| End bp | 255366 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639764834 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_910721 |
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| Protein GI | 119356077 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000338743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGAA AAAAATACAG AGATGCTGTT GCAAAAACGG ATCGATTTCA GGAGTACGAT
CTTGTTGATG CGGTAGAAAA AATCAGGGAG ATAACTCAGG TCAAGTTCGA TGCTACCATT
GATATTGCCA TGAAGCTTGG CGTTGATCCT CGTCATGCTG ATCAGGTAGT GCGTGGTACC
GTCATGCTTC CGCATGGTAC CGGCAAGACG GTATCGGTTC TGGTTGTCTG CAAAGAGGCC
AAAGCTGAAG AGGCTGTTGC TGCCGGAGCT GATTTTGTGG GGTTTGAAGA GTACGTTGAA
AAAATTCAGA ACGGCTGGAC AGGAGTTGAT GTTATCATCG CCACCCCGGA CGTTATGGGT
CAGCTTGGTA AAGTAGCCAA AATTCTTGGG CCAAGGGGTC TTATGCCCAA CCCGAAATCG
GGTACCGTTA CCATGGATGT GGCCAAGGCG GTCAAGGAAG TAAAAGCCGG TAAAATTGAA
TTCAGAGTTG ACAAGGCAGG AAATGTTCAC GCTCCGGTTG GCAAGGTGTC GTTTCAGTCT
GAGCAGTTGG TGGAAAATAT TACCAGTTTT CTTAAAGAGG TCGTACGTCT TAAGCCATCT
GCGGCTAAAG GACAATATGT GCAGGGGATT GCGCTTTCGA GCACCATGTC TCCGAGCGTC
AAGGTCAAAA GGGAAAAATT TGTTGCCTAA
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| Protein sequence | MAGKKYRDAV AKTDRFQEYD LVDAVEKIRE ITQVKFDATI DIAMKLGVDP RHADQVVRGT
VMLPHGTGKT VSVLVVCKEA KAEEAVAAGA DFVGFEEYVE KIQNGWTGVD VIIATPDVMG
QLGKVAKILG PRGLMPNPKS GTVTMDVAKA VKEVKAGKIE FRVDKAGNVH APVGKVSFQS
EQLVENITSF LKEVVRLKPS AAKGQYVQGI ALSSTMSPSV KVKREKFVA
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