| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2090 |
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| Symbol | |
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| ID | 8368551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2504202 |
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| End bp | 2504675 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984544 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_003142195 |
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| Protein GI | 256820916 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACATCA AACTTCTCGC AGTGGGCAAG ACCGATAATC CTGCTTTGCA ACAGCTCATT
GATATGTATG AAAAACGACT TTCGTATTAC ATCAATTTTG AATCGCAACT CTTGCCCGAT
ATTAAGAATA GCAAATCACT ATCGAAAGAG CAACAAAAAG CAAAAGAAGG GGAGCTTATC
CTCGGCAATG TAGCCTCGTC TCATCATCTG ATACTCTTAG ACGAACGTGG CAAAGAGTTT
ACCTCAGTGG CTTTCGCCGA TGAATTGCAA AAGAAAATGA ATGCCGGCAT CAAGCAGCTC
ACCTTTGTGA TTGGGGGACC TTATGGTTTT TCAAAAGAAG TATACGACCG TGCTAATGGC
AAGTTGTCAC TTTCCAAACT CACCTTTTCA CACCAAATGA TACGCCTATT TTTTGTAGAA
CAGCTCTACC GTGCTTTTAC GATTCTCCGT AATGAGCCCT ATCATCATCA GTAA
|
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| Protein sequence | MNIKLLAVGK TDNPALQQLI DMYEKRLSYY INFESQLLPD IKNSKSLSKE QQKAKEGELI
LGNVASSHHL ILLDERGKEF TSVAFADELQ KKMNAGIKQL TFVIGGPYGF SKEVYDRANG
KLSLSKLTFS HQMIRLFFVE QLYRAFTILR NEPYHHQ
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