Gene Clim_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2117 
Symbol 
ID6355095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2337355 
End bp2338089 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID642669708 
ProductABC transporter related 
Protein accessionYP_001944120 
Protein GI189347591 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA CACTGAGCTG CAGCGGACTG AAAAAGATTT ATAACAGACG CGAGGTTGTT 
AAAAGCTCGA CGCTGGAAGT AAAACAGGGA GAAATCGTAG GGCTTCTCGG ACCGAACGGC
GCCGGCAAAA CCACGACTTT TTATATGATT GTAGGGCTTG TGCAGCCTGA CGGCGGTAAA
GTCATGCTTG ACGGCAGAGA CATCACCACC CTGCCTATGC ACAAACGCGC ACGCCTCGGA
ATCGGCTACC TGCCTCAGGA AGCATCGGTG TTCCGCAAGA TGACCGTTGA GAACAACATC
CTCAGCGTTC TTGAGTTCAC CTCCCTTTCA AAAACCGAAC GGCATGAGAA AGCCGAAAAG
ATGCTCGAGG ATCTGAACAT AGCCAATATC CGGAAAAGCA TGGGTTATGC TCTCTCCGGC
GGAGAAAGGC GCCGTACTGA AATTGCCCGG GCTCTGGCGC TCGACCCGAA ATTCATCCTG
CTCGATGAAC CCTTCGCAGG AGTGGATCCT ATCGCTGTCG AGGATATACA ACAGATTGTC
GAAGAGCTGA CAAAACGCAA TATCGGGGTG CTCATCACCG ATCATAACGT GCACGAAACG
CTATCCATCA CCAGCCATGC CTACCTGCTC TTCGACGGCA GCATCTTCAT GCAGGGCTCC
CCGCAGGAAA TTGCCGACAA CCCCGAAGCC CGCAAGTACT ATCTTGGCGA AAAGTTCAGC
CTTGAACGCT ACTGA
 
Protein sequence
MKSTLSCSGL KKIYNRREVV KSSTLEVKQG EIVGLLGPNG AGKTTTFYMI VGLVQPDGGK 
VMLDGRDITT LPMHKRARLG IGYLPQEASV FRKMTVENNI LSVLEFTSLS KTERHEKAEK
MLEDLNIANI RKSMGYALSG GERRRTEIAR ALALDPKFIL LDEPFAGVDP IAVEDIQQIV
EELTKRNIGV LITDHNVHET LSITSHAYLL FDGSIFMQGS PQEIADNPEA RKYYLGEKFS
LERY