Gene Clim_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1790 
Symbol 
ID6354619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1967444 
End bp1967950 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content52% 
IMG OID642669393 
ProductNUDIX hydrolase 
Protein accessionYP_001943808 
Protein GI189347279 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000145412 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGG TTACTCTCAG AGTCAGCGCT CTTTGCGTTC AGCATGATCG TGTGCTGCTT 
ATCGAGCATA AAAGTTTCGC TCCGGACGAT CCGGCCCTGC CCGACCGGTA CTGGATTCTT 
CCCGGCGGAG GCGTCGAGCG GGGTGAAACT GTCGATGAAG CGCTTAAACG GGAGATGATG 
GAAGAGACCG GGCTCGAATG CGAGGTTGGT CCGCTTTTGT TCATCAAGGA ACTCCTCTAT 
CCTTTTCCTG GGTCATGCCG GCCGGGAGGC AGGCATCATT CGGTTTCGCT CGGATTTCAT 
TGCAGGGTTA CGGGAGGAGA GCTGATAACG GGCAGAGATC CTGAATATGG CGACGATGAA 
CAGATGATCA TAGAGGTGAA GTGGGTTCCA TTCGATGAGC TGCATGGCTT CGAACTGTAT 
CCACCGTTTT TGAAGGAGTA TCTTTTTGCT CATCGCAACG GCAGTTTCAG CGATACGGTT 
CCGGAATTCT ATGATTCAAG CCGTTGA
 
Protein sequence
MSKVTLRVSA LCVQHDRVLL IEHKSFAPDD PALPDRYWIL PGGGVERGET VDEALKREMM 
EETGLECEVG PLLFIKELLY PFPGSCRPGG RHHSVSLGFH CRVTGGELIT GRDPEYGDDE 
QMIIEVKWVP FDELHGFELY PPFLKEYLFA HRNGSFSDTV PEFYDSSR