Gene Clim_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0533 
Symbol 
ID6354884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp601431 
End bp602291 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID642668169 
Productrod shape-determining protein MreC 
Protein accessionYP_001942604 
Protein GI189346075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00550121 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAGT TTTTCAATTT TCTCGTCAAA CATAACGCCT ATCTGCTTCT CCTCCTCTAC 
TGCAGCGTCG CGCTGCTGGT CATTCGCTTC GAGCAGGATG ACCTCCTTTC GAAAATCAGG 
AGCGGAGGCA CCGAACTGCA GGCGTCGATC AGTGATAAAA TAACAAGTTA CGGCTACCTG 
TTCAATCTCC GTAAGGAAAA TGAACGACTG ATGAAAATCA ATGCGGAACT CTTGTCGAAA 
GTACTGCGCG ATCAGACGGC TCTGCATGAT GAAAAAAACC GCCGGGCCCT GTTTGCCGAC 
TCAGCCGCCG CTTCGTCCGG CTATATAACC GCACGGGTCA TCGACAGAAA GTTCAGTTCC 
AGGGAAAACA TGCTGCTTAT CGATGCCGGC AAAAAAAGAG GAATCCGCCG CGACATGACG 
GTGCTCACTC CTCAGGGACT TGTCGGCAGG GTAATATTCG TTTCGGATAA TTATGCAAAA 
GTGATGCCGG TTATCCACAG CGATTTCAAG GTAAGCGTCA GTTCCGACAG AAGCAATGCA 
CTGGGGATAC TCAGCTGGAA CGGCGGAGCC GAACATCTTG CAGCTATCGA GCATGTTCCG 
ATAAGCAGCC CCCTCAAAAA AGGAGAAATG ATGCTGACCA CCGACTTCAG CACCTTCTCT 
CCCCGCAGTA TCCCTGTAGG CAGGGTTATA CGCATAAAAC CCGATAAATT ATTCTACAGT 
ATCGATATCC GTCTTGCTGT CGATTTTTCA TCCCTTACCT ATGTCCTGGT TGCTCCTTTA 
AAAAAGGATA CTGAAAAGAT CGAGGCATTT AACGGAGATA TGCCTCAGGA ACAACCCGGA 
ATCATCAACA CTGTGAACTG A
 
Protein sequence
MQKFFNFLVK HNAYLLLLLY CSVALLVIRF EQDDLLSKIR SGGTELQASI SDKITSYGYL 
FNLRKENERL MKINAELLSK VLRDQTALHD EKNRRALFAD SAAASSGYIT ARVIDRKFSS 
RENMLLIDAG KKRGIRRDMT VLTPQGLVGR VIFVSDNYAK VMPVIHSDFK VSVSSDRSNA 
LGILSWNGGA EHLAAIEHVP ISSPLKKGEM MLTTDFSTFS PRSIPVGRVI RIKPDKLFYS 
IDIRLAVDFS SLTYVLVAPL KKDTEKIEAF NGDMPQEQPG IINTVN