| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0250 |
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| Symbol | |
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| ID | 6354707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 281526 |
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| End bp | 282173 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642667879 |
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| Product | surface antigen msp4 family protein |
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| Protein accession | YP_001942324 |
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| Protein GI | 189345795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000237774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATTA TCGATGGGCA TAACGCCCTT TGTACCTTGA ACGATAACCT TATGGAGGAC
TATACGATGA AAATATGGAG ATCAGCACTT GCCGGAGCCC TGCTCATGAT AGGCTCAACA
GCAACAGCCT GTGCGGCAAC CCCTTACGTC AGCGGCTCGG TAGGTATTGC CATGATGGAA
GATTCTGATG TTCAATTCTC CGGCATCGAT GACGGAAGCA TCACATACGA TGCCGGTATG
GCAGCTACGC TTGCGGCGGG GCTCGATATG GGATACACGC GCATCGAAGG CGAAGTCGGA
TACCAGGAAA ACGGAATCGA GGAGAGTGAC GATGTCGAAG TCGCCATCAC GACATTCATG
GTGAACGGCT ATTATGACTT CGAACTCCCG GCCAGTCCAA TAAAACCATA CATTTCCGCA
GGCATCGGTG TCGCCGATGT CAACGCTGAA GAGCTCTCCC TTGGTGACGA CAGCAGCCTT
GTGCTCGCCG GCCAGTTGGG AGCAGGAGTC GGATTTGCCG TAGCGCCTGC GCTGACCCTC
GATGCCAGGT ACCGTTACCT GATGACAACC GAAGCAGAGT TCAACGGCGA CACCGATATC
TCCATCGGCA GCCACAATGT AATGCTCGGC CTCAGATTGG GCTTGTAA
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| Protein sequence | MYIIDGHNAL CTLNDNLMED YTMKIWRSAL AGALLMIGST ATACAATPYV SGSVGIAMME
DSDVQFSGID DGSITYDAGM AATLAAGLDM GYTRIEGEVG YQENGIEESD DVEVAITTFM
VNGYYDFELP ASPIKPYISA GIGVADVNAE ELSLGDDSSL VLAGQLGAGV GFAVAPALTL
DARYRYLMTT EAEFNGDTDI SIGSHNVMLG LRLGL
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