Gene Cla_1489 details

Gene Information

• Locus tag: Cla_1489
• Symbol: nhaA
• ID: 7411235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1433007
• End bp: 1434161
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643718611
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_002576046
• Protein GI: 222824472
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA GAAATTTCCA AAACTTTTTA TCACTTGAAA TTTTAGGAGG ATTGTTGCTT 
TTATTAGCAA CAATCTTTGC CTTGCTACTT AAAAATAGTC CTTATGGACA ACACTATATG 
GATTTTTTAA GTGTGGAAAT GGGTGTAAAA GTGGGTGCTT GGGAACTTTT TAAGCCTTCT 
TTATTATGGA TTAATGATGG TCTTATTGCA ATCTTTTTCT TTGCCATAGG ACTTGAATTA 
AAAAAAGAAT TTGTTCAAGG AGAGTTTAAA ACTCTTAGTA ATATTACCCT ACCCTTAATG 
GCTGCTATAG GCGGTATAGT TGTACCTGCT TTGATATTTT GTGCTATCAA TTTTAATGAT 
GCTTATGTTT TAAAAGGTTG GGCTATACCA ACGGCAACTG ATACTGCATT TGCCCTAGTT 
ATACTTGCAA TGCTAAAACA ACGCATACCA AGTTCTTTGA AAATATTTTT AGTATCTTTA 
GCGATTTTTG ATGATGTAGG AGCTATTTTA ATCATTGCTA TTTTTTACAC AGGGGAACTT 
TCAACTTTAG CCTTTATTGT TGCCTTTTGC TGCATTGTGG GTTTGTTTTT ACTTAATCGC 
TTGAGCAATG AAAGAAAATC ATTTTATTAT ATACTTGGAG CATTACTTTG GCTTAGTGTG 
CTAAAAAGTG GAGTACATGC AACTTTAGCA GGTATCATCA CAGCTTTATT TATACCTGTA 
TATACAAAAA ACAATCACGC TTTATTAGAA GAAATCGAGC ATGGTTTAAA ATTTTGGATA 
GCTTTTATAA TACTACCACT TTTTGCTTTT GCAAACGCAG GGGTTGACCT TTCAAAAATT 
GAAGCACATA TGCTATTTAG TGGTGTGAGC GTAGGGATTT TCTTAGGCTT GTTTATTGGA 
AAACAACTAG GTGTATTTGG CTTTGCTTAT ATGGCAATTA AACTTAAACT TGCAAAGCTG 
CCAAAAGATG CTAATTTTAA ACAACTCTAC GGAGTTTGTA TACTCACAGG TATAGGTTTT 
ACTATGAGCT TTTTTATAGA TGCTCTTGCT TATGAGGTAA GTGATATATT TAATTTTGTG 
GATAATTTTG CTATTTTGCT AGCTTCCCTA GCTTCAGGTG TATTTGGTTA TTTTTACCTG 
CGTTTTATAA AATAA 

 

Protein sequence

MKLRNFQNFL SLEILGGLLL LLATIFALLL KNSPYGQHYM DFLSVEMGVK VGAWELFKPS 
LLWINDGLIA IFFFAIGLEL KKEFVQGEFK TLSNITLPLM AAIGGIVVPA LIFCAINFND 
AYVLKGWAIP TATDTAFALV ILAMLKQRIP SSLKIFLVSL AIFDDVGAIL IIAIFYTGEL 
STLAFIVAFC CIVGLFLLNR LSNERKSFYY ILGALLWLSV LKSGVHATLA GIITALFIPV 
YTKNNHALLE EIEHGLKFWI AFIILPLFAF ANAGVDLSKI EAHMLFSGVS VGIFLGLFIG 
KQLGVFGFAY MAIKLKLAKL PKDANFKQLY GVCILTGIGF TMSFFIDALA YEVSDIFNFV 
DNFAILLASL ASGVFGYFYL RFIK