Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0094 |
Symbol | rpsD |
ID | 7411326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 79766 |
End bp | 80392 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643717230 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_002574711 |
Protein GI | 222823138 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.0810213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAT ATAGAGGACC AGTTGAAAAA TTAGAAAGAC GACTTGGCGT AAGTTTAGCA ATGAAGGGCG AGAGAAGATT AGCAGGTAAA AGCGCTTTAG ATAAACGTCC TTATGCACCA GGTCAGCATG GACAAAGAAA AGCAAAAATT AGTGAATACG GACTTCAATT AAGAGAAAAA CAAAAAGCTA AATTTATGTA TGGAGTTAGC GAAAAACAAT TTAGAAGATT ATTTGCTGAA GCTGCAAGAA AAGATGGCAA CACAGGTGCG CTTTTAATCC AGCTTTTAGA GCAAAGACTT GATAATGTTG TTTATAGAAT GGGCTTTGCG ACAACTCGCC GTTTTGCAAG ACAACTTGTA ACTCATGGAC ATATTTTAGT AAATGGTAAA AGAGTGGATA TTCCTAGTTA TAGAGTTGAA GCAGGTCAAA AAATCGAAGT GATTGAAAAA AGCAAAAACA ATCCACAAAT TTCAAGAGCG ATTGAACTTA CTGCTCAAAC TGGTATAGTT GCTTGGGTTG ATGTAGAAAA AGATAAAAGA TTTGGAATTT TTACAAGAAA ACCTGAAAGA GAAGAAGTTA TCATTCCAGT TGAGGAAAGA TATATCGTTG AGTTGTATTC TAAATAA
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Protein sequence | MARYRGPVEK LERRLGVSLA MKGERRLAGK SALDKRPYAP GQHGQRKAKI SEYGLQLREK QKAKFMYGVS EKQFRRLFAE AARKDGNTGA LLIQLLEQRL DNVVYRMGFA TTRRFARQLV THGHILVNGK RVDIPSYRVE AGQKIEVIEK SKNNPQISRA IELTAQTGIV AWVDVEKDKR FGIFTRKPER EEVIIPVEER YIVELYSK
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