Gene Cla_0059 details

Gene Information

• Locus tag: Cla_0059
• Symbol: rplC
• ID: 7410620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 57221
• End bp: 57796
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643717195
• Product: 50S ribosomal protein L3
• Protein accession: YP_002574676
• Protein GI: 222823103
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 6.39539e-19
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATACA TTGTAGAAAA AATTGGTATG AGTAGAACAA TCAGCACACC AAGCATTCCT 
GTAACCTTAC TTAAACTTGT TCAAACTAAA GTATGTGAAG TAGAAAATGG AAAAGCTTTG 
GTTGCTTATG TAAAAGGCAA AGCAAATAAT AAATGCATTG CAGGTCAGCA AAAAAAATAT 
AATCTTTCAG CTGAATATAA TAGATTTGCT TCTTTAGAAG TAGCAAACAC AGAGGCAGGT 
GATATTGATC TTAATCCTTT AAAAGAAGCT TCTATCTTAA AAGTAAGCTT TAATTCTAAA 
GGTAGAGGTT ATAGCGGGGT TGTTAAAAGA CACGGATTTG CTGGGGGTCC TGCAAGTCAT 
GGTTCAAGAT TCCACAGAAG ACACGGATCA ATTGGTAACC GCGAATGGCC AGGTCGTGTT 
CAACCAGGTA TGAAAATGGC AGGTCATTAT GGTAATGTAA AAGTTACTGT GAAAAACGAA 
GTAGTATCAT TTGATGAAGA AAATGGCATC TTAGTTGTAA AAGGTGCAGT ACCAGGGTTT 
AATGGTGCTA TGGGTAAAAT AAGGATTGCA AAATGA 

 

Protein sequence

MEYIVEKIGM SRTISTPSIP VTLLKLVQTK VCEVENGKAL VAYVKGKANN KCIAGQQKKY 
NLSAEYNRFA SLEVANTEAG DIDLNPLKEA SILKVSFNSK GRGYSGVVKR HGFAGGPASH 
GSRFHRRHGS IGNREWPGRV QPGMKMAGHY GNVKVTVKNE VVSFDEENGI LVVKGAVPGF 
NGAMGKIRIA K