Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0025 |
Symbol | nrdA |
ID | 7410586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 24752 |
End bp | 27127 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717161 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002574644 |
Protein GI | 222823071 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTGC TAAAAAGAAA TGGTAGGACT GAAGAGTTAG ATGTTTCTAA GATTAAAAAA TATACTACCG ATGCAGTTGC AAATTTGGAT AATGTTAGTC AAAGTGAGCT AGAAGTTGAT GCAAAAATTC AATTTCGTGA TGGTATAAGC ACAGAAGAAA TCCAGCAAAC TTTAATCAAA ACAGCAGTAG ATAAAATAGA TATTGATAGA CCTAATTGGA CCTTTGTTGC TGCAAGGTTA TTTTTATATG ATTTGTATAA AAAAGTAAGC GGTTTTACTG GATATAAACA TTTAAGAGAA TACCTTGAAA AAGGTGAAAA AGAAGGTAGG ATTTTAATTG GTTTAAAAGA AAAATATGAT TTAGATGATC TTAATGCTTA TATCAAGCCA GAACGAGATT TGCAATTTAC TTATCTTGGC ATAAAAACTT TATATGATAG ATATTTGATT AAAGATTCTA AGGGTATGCC TATAGAATTA CCACAGCAAA TGTTTATGGC TATAGCTATG TTTTTAGCAC AAAATGAGCT AGATTCTCAA ACTTGGGCTA AGAAATTTTA TGATTTAATC TCAACTTTTG AAGTAATGCT TGCAACCCCA ACCCTTTCAA ATGCAAGAAC CACAAGACAT CAATTAAGTT CATGTTATAT AGGAAGCACT TCTGATAATA TAGAAGGGAT TTTTGATTCT TATCAAGAAA TGGCACTTTT ATCTAAATTT GGCGGTGGTA TAGGCTGGGA TTGGTCTAAG GTGCGTGCTA TGGGTGGAAG TATAGATGGA CATAAAAATG CAGCAGGTGG GATTATACCA TTTTTAAAAA TTACTAATGA TATAGCAGTA GCTGTTGATC AACTTGGCAC TAGAAAAGGT GCAATTGCTG TTTATATTGA ACCTTGGCAT ATGGATATAA ATGACTTTTT AGATTTGCGT AAAAATTCAG GTGAAGAAAG AAGAAGAGCG CATGAGCTTT TCCCTGCTTT GTGGATTAAT GATTTATTCA TGAAAAGAGT AAGAGCAAAT GACAAATGGA CGCTTTTTGA TCCTGCTGAT ACAGCAAGTT TATGTGATTT ATATGGGCAA GAATTTGAAA AAAGATATGA AGAATTTGAA AAAGATGAAA GTATAGTTAA AGAAATTGTT GATGCAAAAG AGCTATGGAA AAAAATACTT TTATCTTACT TTGAAAGTGG CTTGCCGTTT TTGTGTTTTA AAGATAGCGC AAACAAAACA AATCCAAATT CCCACGCAGG GATTATAAGA AGTTCAAATT TATGTACAGA AATTTTTCAA AATACCGAGC CAAATTATTA TCAAATCAAA ATCACATTTG ATGATAAAAC AGAACTTCAT TTAGATGAGG ATGAAGAACT TACAATAGAT GGAGGATATA AAAAGCTTGC TAAAAAAGTT TCTACTTTAG ATAGTATTAA TGGTAAAAAA GTCTATATAG TAGAAAAATA TAAAAACGAA GGAAAAACCG CAGTTTGTAA TCTTGCAAGT ATAAATTTAA GTAAAATCAA CACCAAAGAA GACATCCAAA GAGTAGTACC AACAGCAATA AGAATGCTTG ATAATGTGAT TGATTTAAAT TTTTATCCTC ATGTAAAGGT TAAAAATACC AACCTAAAAT CACGAGCTAT AGGGCTTGGT GTAATGGGCG AAGCACAAAT GCTAGCTGAA GCTCAAATTT ATTGGGGCTC TAATGAACAT TTTGAAAAAA TTGATCGCAT TATGGAGATG ATTAGCTATG AGGCTATTTT AGCTAGTTCC AATTTAGCTT TAGAAAAAGG AAGTTATCCT GACTTTGAAG GATCAAATTG GAGTAAAGGT ATAGTGCCAA TTGATGTAGC AAATGAAAAT GCCAAAAAGC TTACTGCAAG CGAAGGTTTG TTTGATCAAA GTGAGTGTGA TTGGGAAAAA TTAAGAGAAA AACTAAAAAG AGATGGTATA AGAAATGGTT ATTTAATGGC TATAGCGCCA ACCTCTTCTA TTTCTATTTT AGTGGGTACT ACTCAAACAA TCGAACCTGT ATATAAAAGA AAATGGTTTG AGCAAAACTT AAGCGGTATG ATACCAACTG TAGTGCCAAA TTTGAGTGCT AACACTTGGC AGTATTATAC TCCTGCTTAT GAGCTTGATC AAAAAATCCT AGTAAAAGCA GCAGCGATTC GTGGTAAATG GATTGATCAA GGCCAATCTT TAAATATCTT TGTTTCTTTA GATAAAGCAA GTGGTGGGTA TTTAAATGAA ATTTATCAAC TTGCTTGGGA ATTAGGTGTT AAATCAACTT ATTATCTAAG AAGTGAAAGT CCTGATAGTC AAAAAGTAAA TGATGATGTG GTTGATAGAA CTATAGAATG TGAAGGTTGT CAATAA
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Protein sequence | MKVLKRNGRT EELDVSKIKK YTTDAVANLD NVSQSELEVD AKIQFRDGIS TEEIQQTLIK TAVDKIDIDR PNWTFVAARL FLYDLYKKVS GFTGYKHLRE YLEKGEKEGR ILIGLKEKYD LDDLNAYIKP ERDLQFTYLG IKTLYDRYLI KDSKGMPIEL PQQMFMAIAM FLAQNELDSQ TWAKKFYDLI STFEVMLATP TLSNARTTRH QLSSCYIGST SDNIEGIFDS YQEMALLSKF GGGIGWDWSK VRAMGGSIDG HKNAAGGIIP FLKITNDIAV AVDQLGTRKG AIAVYIEPWH MDINDFLDLR KNSGEERRRA HELFPALWIN DLFMKRVRAN DKWTLFDPAD TASLCDLYGQ EFEKRYEEFE KDESIVKEIV DAKELWKKIL LSYFESGLPF LCFKDSANKT NPNSHAGIIR SSNLCTEIFQ NTEPNYYQIK ITFDDKTELH LDEDEELTID GGYKKLAKKV STLDSINGKK VYIVEKYKNE GKTAVCNLAS INLSKINTKE DIQRVVPTAI RMLDNVIDLN FYPHVKVKNT NLKSRAIGLG VMGEAQMLAE AQIYWGSNEH FEKIDRIMEM ISYEAILASS NLALEKGSYP DFEGSNWSKG IVPIDVANEN AKKLTASEGL FDQSECDWEK LREKLKRDGI RNGYLMAIAP TSSISILVGT TQTIEPVYKR KWFEQNLSGM IPTVVPNLSA NTWQYYTPAY ELDQKILVKA AAIRGKWIDQ GQSLNIFVSL DKASGGYLNE IYQLAWELGV KSTYYLRSES PDSQKVNDDV VDRTIECEGC Q
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