| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2926 |
|---|
| Symbol | alr |
|---|
| ID | 7312425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3483694 |
|---|
| End bp | 3484863 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643609826 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_002507200 |
|---|
| Protein GI | 220930291 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.839244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATA AACTTAATAG AGCGTGGGCA GAGATAAGCC TTGACAATAT TGCACACAAT
ATCAGAGAAA TAAGAAAAAT TACTGGCAAA AATGCAGAGA TAATGGGAGT AGTCAAGGCG
GATGCTTATG GACATGGAGT AATGGAGGTG GCAAAAACCC TTCTTGAGAA CGGGGCATCA
CGGTTTGCGG TATCAATGCT GGATGAGGCA ATACAGCTAA GAAGAGCAGG TATAGAGGTT
CCTATACTAA TTCTTGGATA TACCGATCCT ATAAGAGCAA ATGAGATAAT AGAAAATGAT
GTAACGCAGT CGGTATTCAG CCATGATTTG GCACAGGCAT TGTCCGATGA GGCAGTGAGA
CAGGGTAAAA AGGTAAAAAT ACACATAAAA ATAGATACCG GAATGTCCAG AATAGGATTT
CTGCCGGGAT ACAGTGCGGT AAAAAATGTT GTTGATATAA GCACGCTGCC CAATATTATA
ATTGAAGGAC TGTTTACACA CTTTGCTACT GCCGATGAAA AAAACAGGGA TTACACCTAT
ACACAGTTTG AAAGGTTTAT GAGTATTTGC TGTGAGCTTC AGAGAATAGG AATACATATT
CCGGTTAAGC ATTGTGCAAA TAGTGCAGCA GTCATTGAAT ACCCAGAGAT GCATCTTGAT
ATGGTGAGAC CGGGTATTAT ACTTTATGGT ATGTACCCTT CCAGTGAAGT CGACAAGTCA
AAGATTGATC TAAAACCTGC TATGACACTT AAAGCAAATG TGATTATGGT AAAGGAGGTT
GAAAAAAATA CCTCTATAAG CTACGGCAGA ATATTTACAA CCAACAGGAC TTCAAAGATT
GCCACAATTC CTATTGGCTA TGCTGACGGT TTTACCCGCA TGCTTAGCAA TAAAGGGAAG
GTACTTATCC ATGGTGAGCT TGCACCTGTA GTAGGAAGGA TATGCATGGA TCAGTGTATG
GTAGACGTTA CCCATATTGG CAGCAAAGTG GAAGTAGGGG ATGAAGTTGT ATTAATTGGT
TCTCAGGGAC AAAATAATAT TATGGTAGAA GATGTAGCAC AGACAATCGG CATGATAAAT
TATGAATTGG TTTGCATAGT CGGTAAAAGA ATTCCAAGGG CTTTTGTAAA AGATGGAAAG
ATATCGAAAA TCCTGAATTA TTTGATATGA
|
|---|
| Protein sequence | MEYKLNRAWA EISLDNIAHN IREIRKITGK NAEIMGVVKA DAYGHGVMEV AKTLLENGAS
RFAVSMLDEA IQLRRAGIEV PILILGYTDP IRANEIIEND VTQSVFSHDL AQALSDEAVR
QGKKVKIHIK IDTGMSRIGF LPGYSAVKNV VDISTLPNII IEGLFTHFAT ADEKNRDYTY
TQFERFMSIC CELQRIGIHI PVKHCANSAA VIEYPEMHLD MVRPGIILYG MYPSSEVDKS
KIDLKPAMTL KANVIMVKEV EKNTSISYGR IFTTNRTSKI ATIPIGYADG FTRMLSNKGK
VLIHGELAPV VGRICMDQCM VDVTHIGSKV EVGDEVVLIG SQGQNNIMVE DVAQTIGMIN
YELVCIVGKR IPRAFVKDGK ISKILNYLI
|
|---|
| |