Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2119 |
Symbol | |
ID | 7310817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2483235 |
End bp | 2486063 |
Gene Length | 2829 bp |
Protein Length | 942 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609053 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_002506444 |
Protein GI | 220929535 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000168396 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAGGG ATAATATTTT TATAAAAGGT GCACGTGAAC ATAACCTGAA AAATGTTGAT GTAGAGATAC CGAGAGATAA ATTTGTTGTT ATAACAGGAT TGAGTGGTTC AGGTAAGTCT TCTCTTGCCT TCGATACAAT TTATGCAGAA GGTCAGAGGA GGTATGTTGA ATCTCTCTCA TCCTATGCAA GACAGTTTCT TGGACAGATG GACAAGCCGG ATGTAGACTA TATCGAAGGT TTGTCACCGG CAATATCTAT AGATCAGAAG ACAACCACCA GAAACCCAAG ATCTACAGTA GGAACTGTAA CTGAAATTCA TGATTATCTC AGACTCCTAT ACTCAAGGAT AGGAATTCCT CATTGCCCTA AGTGCGGCAA GGAGATTGCA CAGCAAACTA TTGACCAGAT GGTGGATCAG ATAGTATCTT TTGAAGAAGG CACCAGGATA CAGTTACTTG CTCCTGTAGT TAGAGGGAGA AAAGGTGAGT ATCATAAGCT CATAGAGAAT GCAAAAAAAG ACGGCTTTGT GAGATTGCGT GTAGACGGGC AAATAGTAGA TGTAAATGAA GAGATTAAGC TGGACAAAAA TAAAAAGCAT AATATTGAGA TAGTCGTTGA TAGGCTTGTA GTCCGTGGAG ATATTCAGAA AAGACTGGTT GATTCATTGG AGACAGTACT TCGCTTAAGC GGTGGTATAG TTATTGTTGA TTTAGTAGGT AAAGAAGAAA TACTATTTAG TCAGAACTTT GCATGCAGTG ATTGCGGAAT TAGTATAGAA GAGCTTGTAC CAAGAATGTT TTCATTTAAC AATCCGTTTG GTGCCTGCCA AACATGTACA GGATTGGGAA ATCTCATGAA GGTAGATCCC GAGCTTGTTA TACCTGACAG GTCTCTGTCA CTTACAAATG GTGCAATTAG TGTTACAGGT TGGAATATTG GGAGTGAGGA TGCGTATATC AGGATGATAT TCAATGCTCT TGCCAAACAT TACAAATTTG ATTTAGATAC ACCGTTTAAT AAGCTGTCCG GAGAAATAAT AGATATTATA CTTTATGGGA CAAGGGGCGA AAAAATAAAA GTAGATTACG AAAGAGAGTA CGGCAGCGGG TCTTATATGG CGGGATTTGA GGGTGTAATT AATGCAATTG AACGCCGCCA CAATGAGACC CAGTCCGAAA GTTCGAAACA GTATTACGAA CAGTTCATGA GCAACAACCC ATGCCCGGAC TGTAAAGGTG CCAGATTAAA ACCTGAAAGT CTTGCTGTTA CAGTAGGGGG TAAAAATATA CACAAAGTAT CTTCCATGTC TGTAGCAGAT ACAAAAGATT TCTTTGACAA CATTGAGCTT AGTGAAAGAG ACAAGATGAT AGCAAACCAG ATTTTAAAAG AGATTGCAGC CAGAATAGGC TTTCTCGTTG ACGTTGGTCT GGACTACCTT ACACTTTCCA GACCGGCTGG GACTTTATCC GGAGGAGAGG CACAGAGAAT AAGGCTAGCT ACCCAGATTG GCTCGGGCTT GATGGGGGTA CTTTATATTC TGGATGAACC CAGTATCGGA CTGCATCAAA GAGATAACGA AAAGCTTCTT AAAACCTTAA ACCGACTTAG GAACCTTGGA AATACGCTAA TTGTTGTAGA GCATGACGAA GATACCATGA ATGCAGCAGA TCATATCATA GATATGGGTC CGGGTGCTGG AATCCATGGC GGACACGTTG TTGCAGAGGG AACCCTCGAT AAAATATTAA AAAGTGAAAA ATCACTTACA GGACAATACC TTAGCGGACG AAAAAAAATA GAGGTTCCAG AGATAAGAAG AAAACCAAAC GGAAAATGGC TGGAAATTGT GGGAGCAAGG CAGAATAATC TTAAAAACAT CAACGCAAAG ATTCCTCTCG GGGTGTTAAC ATCAGTTACG GGTGTTTCCG GCTCGGGAAA AAGTACATTG ATAAATGAGA TTTTGTATAC CAGTCTTGCC AGCCAGTTAT ATAGAGCCAA GGCAAGACCG GGTAATCATG ATACAATAAA AGGTATTAAA AATATTGACA AGGTTATAAG TATTGACCAA TCACCAATCG GAAAAACCCC GAGATCAAAC CCGGCAACCT ACACAGGTGT TTTTGATCTT ATCAGAGAAG TTTTTGCTTC AACTACCGAA GCAAAAATGA AAGGATACAA AAACGGACGG TTCAGCTTTA ATATAAAGGG TGGAAGGTGT GAAGCCTGCT CCGGGGATGG AATTATAAAA ATTGAAATGC ATTTCCTTCC TGACGTATAT GTTCCTTGTG AAGTTTGTAA GGGAAAAAGG TACAACAGGG AGACTCTGGA AGTTAAGTAC AAGGGGAAAA GCATATCGGA TGTTCTAAAT ATGACAATTG ACGATGCCCT GGAGTTTTTC AAGAACATCC CCAAGATACA AAGAAAATTC CAAACATTGT ATGATGTCGG CTTGGGGTAT GTCAAGGTTG GTCAGCCATC TACAACCCTG TCGGGAGGCG AGGCCCAGAG AGTAAAGCTT GCTACCGAGT TATCCAAGCG AAGTACAGGA AAGACACTGT ACATTTTGGA CGAGCCTACA ACCGGACTTC ATGTAGCTGA TGTTCACAGA TTGATAGATA TTCTTCAAAG GCTTGTGGAT GCGGGTAATT CCATAGTAGT TATTGAACAC AATCTTGACG TCATAAAAAC TTCTGATTAT ATAATTGATC TTGGACCCGA AGGTGGTAAC AAGGGAGGAA CGATTATTGC ACAGGGAACG CCCGAAGAAG TTGCAAAAGT GAAAGAATCC TATACAGGTC AATATCTAAG TAAAATTTTA GAAAAATAA
|
Protein sequence | MIRDNIFIKG AREHNLKNVD VEIPRDKFVV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS SYARQFLGQM DKPDVDYIEG LSPAISIDQK TTTRNPRSTV GTVTEIHDYL RLLYSRIGIP HCPKCGKEIA QQTIDQMVDQ IVSFEEGTRI QLLAPVVRGR KGEYHKLIEN AKKDGFVRLR VDGQIVDVNE EIKLDKNKKH NIEIVVDRLV VRGDIQKRLV DSLETVLRLS GGIVIVDLVG KEEILFSQNF ACSDCGISIE ELVPRMFSFN NPFGACQTCT GLGNLMKVDP ELVIPDRSLS LTNGAISVTG WNIGSEDAYI RMIFNALAKH YKFDLDTPFN KLSGEIIDII LYGTRGEKIK VDYEREYGSG SYMAGFEGVI NAIERRHNET QSESSKQYYE QFMSNNPCPD CKGARLKPES LAVTVGGKNI HKVSSMSVAD TKDFFDNIEL SERDKMIANQ ILKEIAARIG FLVDVGLDYL TLSRPAGTLS GGEAQRIRLA TQIGSGLMGV LYILDEPSIG LHQRDNEKLL KTLNRLRNLG NTLIVVEHDE DTMNAADHII DMGPGAGIHG GHVVAEGTLD KILKSEKSLT GQYLSGRKKI EVPEIRRKPN GKWLEIVGAR QNNLKNINAK IPLGVLTSVT GVSGSGKSTL INEILYTSLA SQLYRAKARP GNHDTIKGIK NIDKVISIDQ SPIGKTPRSN PATYTGVFDL IREVFASTTE AKMKGYKNGR FSFNIKGGRC EACSGDGIIK IEMHFLPDVY VPCEVCKGKR YNRETLEVKY KGKSISDVLN MTIDDALEFF KNIPKIQRKF QTLYDVGLGY VKVGQPSTTL SGGEAQRVKL ATELSKRSTG KTLYILDEPT TGLHVADVHR LIDILQRLVD AGNSIVVIEH NLDVIKTSDY IIDLGPEGGN KGGTIIAQGT PEEVAKVKES YTGQYLSKIL EK
|
| |