Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1654 |
Symbol | xerC |
ID | 7312262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1994805 |
End bp | 1995797 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608582 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002505985 |
Protein GI | 220929076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000234006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA TTTTTGATTT TGAAATGCCT TTGGTTTTAA AGGATTTTTT AAACTATCTT CAGACTATAA AGGGTAAATC TAAAAACACT ATACAGGTTT ATTTCTATGA TCTTAGAATT TTTTTACGTT TTCTTAAAAT ACATAGAAAT TTAGTGGATA AAAACATCGA ATTTAATAGC ATAGATATTA CGGATGTTGA TATATCTCTA TTAAAGACGG TTACACTCAG TGATTTATAT ACGTATATGT CCTTTGTCAG CAATAAAAGA GATAATACAT CTCATGCACG TGCAAGAAAG GTTGCCAGTC TTAAATCTTT TTTTAACTAC CTATCGACAA AGGCAAAGCT CCTGGATATA AACCCTACCA TAGAACTGGA ATCTCCAAAG ATATTAAAGA GACTGCCCAG ATATCTTAAT TTTGATGAGA GCAAAAAACT CTTAACCTCT GTAAATAAAG CAGATCACGA ATATGCAATC AGAGACTACG CAATAATTAC AATTTTTCTA AACTGTGGAA TTCGTCTTTC GGAGCTAGTT GGAATTAATC TGCACAACAT AAAGGACAAC ACGCTTATAG TATTCGGCAA GGGCGGAAAA GAACGCAGCA TCCCTTTGAA TAGAGCATGT CTTCAGGCTA TAGACGACTA CTTGAAGGTA CGTCCTGTTA ATGGATTGAA AGACAAAAGT GCTTTATTTA TAAGCAGAAG AAATCAGCGT ATCAGCAAGG AATCGGTACA GAAAATTGTT AAAAGGTACA TAACAGAAGC CGGGTTGGAT CCCCAACGTT ATTCTACCCA CAAACTGAGA CATACCGCAG CAACTCTGAT GTATAAATAC GGGAACGTTG ATATCAGGGC TTTACAGGAG ATACTTGGCC ATGAAAGTAT TTCTACTACC GAAATATATA CCCATCTGGA TCAGCAGCAG CTAAAGGAAG CTGTAGATAA ACACCCCCTT TCAGATTTCG GTGTTGTAAA ACAAAGTAAA TAA
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Protein sequence | MKNIFDFEMP LVLKDFLNYL QTIKGKSKNT IQVYFYDLRI FLRFLKIHRN LVDKNIEFNS IDITDVDISL LKTVTLSDLY TYMSFVSNKR DNTSHARARK VASLKSFFNY LSTKAKLLDI NPTIELESPK ILKRLPRYLN FDESKKLLTS VNKADHEYAI RDYAIITIFL NCGIRLSELV GINLHNIKDN TLIVFGKGGK ERSIPLNRAC LQAIDDYLKV RPVNGLKDKS ALFISRRNQR ISKESVQKIV KRYITEAGLD PQRYSTHKLR HTAATLMYKY GNVDIRALQE ILGHESISTT EIYTHLDQQQ LKEAVDKHPL SDFGVVKQSK
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