Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0678 |
Symbol | |
ID | 7312133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 783365 |
End bp | 784705 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643607618 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_002505038 |
Protein GI | 220928129 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000258003 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA AGATAGGCAT CGTCTCATTG GGATGCCCCA AGAATTTAGT AGACAGCGAG ATAATGCTGG GTATGCTGTC ACATTCAGAT TATGAAATTG TAAACAGCAA GGAAGATGCG GATGTACTTA TAGTAAATAC ATGCGGATTT ATTGAATCCG CTCAGCAGGA ATCTATAAAT ACAATTTTAG AAATGGCAGA GGAAAAGGGA CGTAATTGCG AGGTACTTAT AGTTACAGGA TGTATGGCAG AAAGATATAA AGAAAAAATA CTTGAACAAA TACCGGAAGT GGATGCTGTT CTGGGTACAG GGAATTATAA AGAAATAGCG GAAGTAATAA ATCTTGCGTA TATGGGTGAA AAAACAGTAG CTTATGGAAA GTTGGATGAA ACGGATTATC TTGATGAAGA GAGAGTACTA TCATCCAGCA AACATTCTGT CTACTTAAAG ATATCAGAAG GATGTGACAA CCGCTGCACA TACTGTATAA TACCATTTTT GAGAGGTAAA TACAGGAGCC GTAAAATGGA GTCTTTGGTC AGAGAAGCTG AGCTTTTGGC TGGAAAAGGT ACAAAGGAAA TCGTTATCGT TGCACAGGAC AGTACTCGCT ACGGTATTGA CTTATATGGC AAAAAGATGC TTCCTGAATT AATCAGAAAG ATATCGGATA TTAGTGGAAT AGAATGGGTA AGGCTTTTGT ATTGCTACCC TGAGGAAATA GATGATGAGC TGATTAACGA AATAGCTATA AATCCAAAGG TGTGCAAATA CCTTGACATA CCTATTCAGC ATGCATCCGA TAGAGTACTA AAGCAAATGG GAAGAAGAGG AACTATTTCT GAGATTAAGC AGGTACTAAA CAAATTAAGA GAGAAAGTCA GCGGCATTAC TATCAGAACA TCACTGATTG TAGGCTTTCC AGGTGAGACA GAGGAAGATT TTGAAGAATT GATGGCCTTT GTAAAAGAAT TCAGATTGGA TAGAGTGGGT GTATTCACAT ATTCAAAAGA AGAGGGTACA GCGGCTGCAA AGATGAAAAA CCAGATACCA AAGCACATTA AAATAAAAAG GCAAAAAAAG ATTCTTGAGC TTCAAAATGT AATTAGCAGG GAAATAAATC AAAGTAGGAA TGGAAAAGTC TACAAAACTA TAGTTGACGG TATTGCTGAT GATGGTATAT TCTATTATGG ACGTACTTAT GCAGAAGCTC CTGAAATTGA TGGGATTATT TATTTTACAA GTCCCGAGGA GCTTTCAATA GGTAGTTTTA TAAATGTAAG GATTCTCAAT ACCGAAGATT ATGATTTGAT AGGAGAGGTC ATAAATGAAT TTACCGAATA A
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Protein sequence | MKKKIGIVSL GCPKNLVDSE IMLGMLSHSD YEIVNSKEDA DVLIVNTCGF IESAQQESIN TILEMAEEKG RNCEVLIVTG CMAERYKEKI LEQIPEVDAV LGTGNYKEIA EVINLAYMGE KTVAYGKLDE TDYLDEERVL SSSKHSVYLK ISEGCDNRCT YCIIPFLRGK YRSRKMESLV REAELLAGKG TKEIVIVAQD STRYGIDLYG KKMLPELIRK ISDISGIEWV RLLYCYPEEI DDELINEIAI NPKVCKYLDI PIQHASDRVL KQMGRRGTIS EIKQVLNKLR EKVSGITIRT SLIVGFPGET EEDFEELMAF VKEFRLDRVG VFTYSKEEGT AAAKMKNQIP KHIKIKRQKK ILELQNVISR EINQSRNGKV YKTIVDGIAD DGIFYYGRTY AEAPEIDGII YFTSPEELSI GSFINVRILN TEDYDLIGEV INEFTE
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