Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0536 |
Symbol | |
ID | 7309409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 622362 |
End bp | 623687 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607470 |
Product | protein-export membrane protein SecD |
Protein accession | YP_002504898 |
Protein GI | 220927989 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000245038 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGAA GCAACGCGGT TAAATTTTTC TCGATATTGG TTATCATCGG AATTTTAACC TGGATAGCAG CTTACGGTTC TATCCTGGGG GTTGAAATAC CTGGTGTTAG AGATATCAGA ACAGGTATTG ATATTCAGGG AGGCGTAGAC GCAAGACTTT ATGCAGTTAC CAAGGATAAC AGCAAGCCAA AGGCTGAGGA TTTGGATGCT GCAAGAATTA TTATCGGTAA GAGATTGGAT TCAAAAAATA TCTTTGATAG AGTTATTACT GTAGATAAGG ATAAGGGATA CGTTCTGGTG CAGATACCGC ATAAAAAAGG TGAAGCATTC GATCCACAGA GATCAATAGA AGAAATTGGT AAAACCGCAT TATTAACCTT CCAAGAGGTT GACGAAAGTA AAAAAGATTC AAATGGTTAC CTTCCAACCG GCAAGATTAT TCTTGAAGGT TCAGACGTAA AGGAGGCATC TGCTGAAGTT GATGGCGAAA ACGGTGGTTA TTGCGTTGCA CTGACACTTA CATCAGAAGG CGGTAAGAAG TTTTCAGAAG CAACGGGAAG ACTTATTGGG AAACCAATAG CGATTTTTAT GGACAATGAT TTAATCAGTG CACCAAATGT TCAGACACAA ATTTCTGGTA ATTCCGCAAG AATTACTCTT GGTGGTACTG CCAGTAATGA ACAAAGGGAT GAGGCTAAAA ATTTGGCCGG CCTTATTAAG TCAGGTTCAT TGCCATTTAA GTTAGAGGCA AGGCAGGTAA ATAATATAAG CCCTACGCTT GGGTCTAATG CACTTAAAGT TAGTATTGAA GCCTTTATAG TTGCACTTAT ACTGATTTGC TTATTTATGA TATTCTATTA CAGATTGCCG GGTTTAATTG CAAGTATTGC TTTGATACTT CATACAGTCA TGGAATTATT GGCTTTGTCC TGGACCAATA TAATCGTTAC TTTACCGGGT ATAGCGGGTC TCATACTAAC AGTAGGTATG GCCGTTGATG CCAACGTTAT AATATTTGAA AGAATAAAAG ATGAGCTTAA AAACGGAAAA ACCCTTCGTG CAGCTATTGA TGTTGGATTT AAAAGAGCAT TCTCAGCTGT ACTTGACTCA AATATAACTA CTCTTATATC TGCCGTAGTT TTATGGAAAT TTGGTTCAGG CCCTATACAG AGTTTTGCGT ATACTCTGGG AATAGGTGTT GTATTAAGTT TCTTAACCGC TGTAACTGCT TCAAGGATAA TGCTGCAGTC AATACAGGAT TTGGAAGTTG CAAAACACCA TTGGTTATAT GGCGTAAGTA TGAGAGGAGG AAAAGCAAAT GGTTAA
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Protein sequence | MRGSNAVKFF SILVIIGILT WIAAYGSILG VEIPGVRDIR TGIDIQGGVD ARLYAVTKDN SKPKAEDLDA ARIIIGKRLD SKNIFDRVIT VDKDKGYVLV QIPHKKGEAF DPQRSIEEIG KTALLTFQEV DESKKDSNGY LPTGKIILEG SDVKEASAEV DGENGGYCVA LTLTSEGGKK FSEATGRLIG KPIAIFMDND LISAPNVQTQ ISGNSARITL GGTASNEQRD EAKNLAGLIK SGSLPFKLEA RQVNNISPTL GSNALKVSIE AFIVALILIC LFMIFYYRLP GLIASIALIL HTVMELLALS WTNIIVTLPG IAGLILTVGM AVDANVIIFE RIKDELKNGK TLRAAIDVGF KRAFSAVLDS NITTLISAVV LWKFGSGPIQ SFAYTLGIGV VLSFLTAVTA SRIMLQSIQD LEVAKHHWLY GVSMRGGKAN G
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