| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0536 |
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| Symbol | |
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| ID | 7309409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 622362 |
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| End bp | 623687 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607470 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_002504898 |
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| Protein GI | 220927989 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000245038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGAA GCAACGCGGT TAAATTTTTC TCGATATTGG TTATCATCGG AATTTTAACC
TGGATAGCAG CTTACGGTTC TATCCTGGGG GTTGAAATAC CTGGTGTTAG AGATATCAGA
ACAGGTATTG ATATTCAGGG AGGCGTAGAC GCAAGACTTT ATGCAGTTAC CAAGGATAAC
AGCAAGCCAA AGGCTGAGGA TTTGGATGCT GCAAGAATTA TTATCGGTAA GAGATTGGAT
TCAAAAAATA TCTTTGATAG AGTTATTACT GTAGATAAGG ATAAGGGATA CGTTCTGGTG
CAGATACCGC ATAAAAAAGG TGAAGCATTC GATCCACAGA GATCAATAGA AGAAATTGGT
AAAACCGCAT TATTAACCTT CCAAGAGGTT GACGAAAGTA AAAAAGATTC AAATGGTTAC
CTTCCAACCG GCAAGATTAT TCTTGAAGGT TCAGACGTAA AGGAGGCATC TGCTGAAGTT
GATGGCGAAA ACGGTGGTTA TTGCGTTGCA CTGACACTTA CATCAGAAGG CGGTAAGAAG
TTTTCAGAAG CAACGGGAAG ACTTATTGGG AAACCAATAG CGATTTTTAT GGACAATGAT
TTAATCAGTG CACCAAATGT TCAGACACAA ATTTCTGGTA ATTCCGCAAG AATTACTCTT
GGTGGTACTG CCAGTAATGA ACAAAGGGAT GAGGCTAAAA ATTTGGCCGG CCTTATTAAG
TCAGGTTCAT TGCCATTTAA GTTAGAGGCA AGGCAGGTAA ATAATATAAG CCCTACGCTT
GGGTCTAATG CACTTAAAGT TAGTATTGAA GCCTTTATAG TTGCACTTAT ACTGATTTGC
TTATTTATGA TATTCTATTA CAGATTGCCG GGTTTAATTG CAAGTATTGC TTTGATACTT
CATACAGTCA TGGAATTATT GGCTTTGTCC TGGACCAATA TAATCGTTAC TTTACCGGGT
ATAGCGGGTC TCATACTAAC AGTAGGTATG GCCGTTGATG CCAACGTTAT AATATTTGAA
AGAATAAAAG ATGAGCTTAA AAACGGAAAA ACCCTTCGTG CAGCTATTGA TGTTGGATTT
AAAAGAGCAT TCTCAGCTGT ACTTGACTCA AATATAACTA CTCTTATATC TGCCGTAGTT
TTATGGAAAT TTGGTTCAGG CCCTATACAG AGTTTTGCGT ATACTCTGGG AATAGGTGTT
GTATTAAGTT TCTTAACCGC TGTAACTGCT TCAAGGATAA TGCTGCAGTC AATACAGGAT
TTGGAAGTTG CAAAACACCA TTGGTTATAT GGCGTAAGTA TGAGAGGAGG AAAAGCAAAT
GGTTAA
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| Protein sequence | MRGSNAVKFF SILVIIGILT WIAAYGSILG VEIPGVRDIR TGIDIQGGVD ARLYAVTKDN
SKPKAEDLDA ARIIIGKRLD SKNIFDRVIT VDKDKGYVLV QIPHKKGEAF DPQRSIEEIG
KTALLTFQEV DESKKDSNGY LPTGKIILEG SDVKEASAEV DGENGGYCVA LTLTSEGGKK
FSEATGRLIG KPIAIFMDND LISAPNVQTQ ISGNSARITL GGTASNEQRD EAKNLAGLIK
SGSLPFKLEA RQVNNISPTL GSNALKVSIE AFIVALILIC LFMIFYYRLP GLIASIALIL
HTVMELLALS WTNIIVTLPG IAGLILTVGM AVDANVIIFE RIKDELKNGK TLRAAIDVGF
KRAFSAVLDS NITTLISAVV LWKFGSGPIQ SFAYTLGIGV VLSFLTAVTA SRIMLQSIQD
LEVAKHHWLY GVSMRGGKAN G
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