Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1950 |
Symbol | |
ID | 5899405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2089984 |
End bp | 2092749 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641562440 |
Product | ABC transporter related |
Protein accession | YP_001683577 |
Protein GI | 167645914 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.62728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCC GACCCGGCCC GGACGCAACG CCTCCGGTCG CCCGGCTCGC GGGGGTCAGT CTCGACTATC GGGGCACGCG GGCCCTGGAC AACATCGATC TCGACATCCC GGCGGGCCGG ATGGTGGCGC TGATCGGCCC CGACGGGGTG GGCAAGTCGA CGCTGTTCTC GCTGATCGCC GGCGCGCGGG TCATCCCCTC GGGCACGGTG GAGGTGCTCG GCGGCGACAT GGCCGACCGT CGGCACCGCG AGGCGGTCTG TCCTCGCATC GCCTACATGC CCCAGGGGCT GGGCAAGAAC CTCTATCCGA CGCTGTCGGT CTTCGAGAAC CTGGACTTCT TCGGCCGGCT GTTTGGCCAG GACGGGGCGG AGCGTGAGCG CCGGATCACC GACCTGCTGG ACAGCACAGG TCTCGCACCC TTCAAGGACC GGCCCGCCGG CAAGCTGTCC GGCGGCATGA AGCAGAAGCT GGGCCTGTGC TGCGCCTTGA TCCACGATCC CGACTTCCTG TTGCTGGACG AGCCGACGAC GGGGGTCGAT CCGCTGTCGC GGTCGCAGTT TTGGGATCTC ATCGACCGCA TCCGCGCCGC GCGCCCCGGC ATGAGCGTGT TGGTGGCCAC CGCCTATATG GAGGAGGCTG CGCGGTTCGA TTGGCTTGTG GCCATGGACG CTGGCAAGGT CCTGGCGACT GGCTCTCCCG ACGCGCTCTA TCAACGCACC GGCACGACCG ATCTCGAACA GACCTTTATC GCCCTGTTGC CCGAGGAACG CCGGCGTGGG GCCCAGCCCG TGACCATTCC GCCGCGTCTG CACGCGGGCG AGGGCGACAT CGCCATCGAG GCGAAGGGCC TGACCATGCG GTTTGGGGAT TTCACCGCCG TCGATCAGGT GGATTTTCAG ATCGAGCGCG GCGAGATCTT CGGGTTCCTG GGGTCGAACG GCTGCGGCAA GACCACCACG ATGAAGATGC TGACCGGCTT GCTGCCCGCC ACCGCCGGCG AGGCGCATCT GTTTGGCCGC CTGGTGAACG CGGGCGACAT CCAGACCCGT CGGCGGGTCG GCTACATGTC CCAGGGCTTC TCGCTGTATT CGGAACTGAC CGTCGCGCAA AACCTGGAGC TCCACGCGCA GCTGTTCGGG ATGGAGGCGC GAGACATCCC GGATCGGATG ACGGAGATGG CCGAGCGCTT TGGACTGGCC GACCTGATGG ACGCGCTACC GGACGCTCTG CCCCTGGGCC AGCGCCAGCG TCTTTCCCTC GCCGTCGCCA TGATCCACAA GCCGGAAATC CTGATCCTCG ACGAGCCGAC CTCTGGCGTC GACCCCATCG CCCGCGACCA GTTCTGGCAG AGCATGATCG ACCTGTCGCG GCAGGACGGG GTGACGATCT TCATCTCCAC CCACTTCATG AACGAGGCCG CGCGCTGTGA TCGCATCTCG CTGATGCACG CGGGCAAGGT GCTGGTCAGC GATGCCCCGG CGCGCATCGT CGAGCAGCAG GGCGCCAAGT CCCTGGAAGA GGCTTTCATC AGCTATCTGA AGGCGGCCGA GGGAGACGAC GCCCCGCCGC CCGCGCCTGC GTCTCCCCCC AGCGACACGG TCGCTCAGCC GCCGCGCCCG GGGCGCGGCT GGCTGGGCGG CTTTAGTCCT CGGCGGATGA TGAGCTATTC GCGGCGCGAG GCGCTTGAAC TGCGCCGCGA CCCGATCCGG GCGACCCTGG CCCTGCTGGG CAGTGTGATC CTGATGTTCA TCATGGGCTA CGGCATCAGC ATGGACGTCA AGGACCTGCC GTTCGCCGTG CTGGACCGCG ACGGGACGAC CACGAGCCAG GACTACGCGC TCAACATCGC CGGCTCGCCC TATTTTCTGG AGCGACGGCC GATCTCGGAC TATGGCGAAC TGGATCGGCG GATGCGGTCG GGCGAACTGA GCGTGGCGAT CGAGATCCCG CCCGGCTTCG CCCGGGACCT GCGCCGGGGG GACACGGTGG CGCTGGGCGT GTGGATCGAC GGCGCCATGC CCCAGCGCGC CGAAACCGTG CAGGGCTACA TCCAGGCGCT GCACGCCCAA TGGCTGAGCG ACATGTCCGT TCGAGAGCTT GGGGTGCGGC CGTCGACCGG CTTGATCAAC ATCGAAACCC GCTATCGCTA CAATCCCGAC GTCAAGAGCC TGGTGGCGAT CGCGCCCGCG GTCATCCCCG TGCTGCTGCT GCTGTTTCCG GCCATACTGA CGGCGCTGAG CGTCGTGCGG GAAAAGGAGC TGGGCTCGAT CATCAACTTC TACGTCACCC CGGTCACGGC ACTGGAATTT CTGCTGGGCA AGCAGGCGCC CTATGTGGCG CTGGCCATGT TGAACTATGC CCTGCTGGTC GTGCTGTCCC TGTCGACCTT CCGCGTGCCG ATCACTGGCG ACATCGTGGC CATGACCTTG GGCGCCCTGC TCTATGTCCT GTCCTCGACG GCGATCGGCT TGCTGTTCTC GATCTTCATG CGCAGCCAGA TCGCCGCGCT GTTCGCCACC GCCATCGGCA CGATCCTGCC GGCCGTGCAG TTTTCGGGAC TGATCAATCC GGTCTCGTCG CTGGAGGGAG CCGGGGCGGT CATTGGTCGC GTCTTCCCGA CCAGTCATTT TGTCACCATC TGCCGCGGCG TGTTCTCCAA GGGACTGGGG TTTCCCGATC TCCAGCCGGA ACTGCTGAGC CTGGCGGTCA CCTTCCCGCT GCTGCTGGCC GCCTGCGTCA TGTTGCTCAA GAAACAGGAA CACTAG
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Protein sequence | MTARPGPDAT PPVARLAGVS LDYRGTRALD NIDLDIPAGR MVALIGPDGV GKSTLFSLIA GARVIPSGTV EVLGGDMADR RHREAVCPRI AYMPQGLGKN LYPTLSVFEN LDFFGRLFGQ DGAERERRIT DLLDSTGLAP FKDRPAGKLS GGMKQKLGLC CALIHDPDFL LLDEPTTGVD PLSRSQFWDL IDRIRAARPG MSVLVATAYM EEAARFDWLV AMDAGKVLAT GSPDALYQRT GTTDLEQTFI ALLPEERRRG AQPVTIPPRL HAGEGDIAIE AKGLTMRFGD FTAVDQVDFQ IERGEIFGFL GSNGCGKTTT MKMLTGLLPA TAGEAHLFGR LVNAGDIQTR RRVGYMSQGF SLYSELTVAQ NLELHAQLFG MEARDIPDRM TEMAERFGLA DLMDALPDAL PLGQRQRLSL AVAMIHKPEI LILDEPTSGV DPIARDQFWQ SMIDLSRQDG VTIFISTHFM NEAARCDRIS LMHAGKVLVS DAPARIVEQQ GAKSLEEAFI SYLKAAEGDD APPPAPASPP SDTVAQPPRP GRGWLGGFSP RRMMSYSRRE ALELRRDPIR ATLALLGSVI LMFIMGYGIS MDVKDLPFAV LDRDGTTTSQ DYALNIAGSP YFLERRPISD YGELDRRMRS GELSVAIEIP PGFARDLRRG DTVALGVWID GAMPQRAETV QGYIQALHAQ WLSDMSVREL GVRPSTGLIN IETRYRYNPD VKSLVAIAPA VIPVLLLLFP AILTALSVVR EKELGSIINF YVTPVTALEF LLGKQAPYVA LAMLNYALLV VLSLSTFRVP ITGDIVAMTL GALLYVLSST AIGLLFSIFM RSQIAALFAT AIGTILPAVQ FSGLINPVSS LEGAGAVIGR VFPTSHFVTI CRGVFSKGLG FPDLQPELLS LAVTFPLLLA ACVMLLKKQE H
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