Gene Cagg_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0081 
Symbol 
ID7266819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp114062 
End bp115045 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content59% 
IMG OID643564954 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002461470 
Protein GI219847037 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGA TCAAAGATGT TGCCCGCCGC GCTGGGGTGA GTGTCACCGC GGCATCATAC 
GCGCTCAACC GCACCGGTAC CATCAGCGAA GAGACGCGCC AGCGCGTGCT GCAAGCGGCA
GAGGAGCTCA ACTATCATCC GAATGCCTTT GCCCGCCACC TCAAAGCGCG CCGATCGCGC
ACGATCGGGG TATTTATCAC CCGTTTCGCC GGCGCGTTCT ACGAAGAGAT TCTCGATGGG
ATTCACGAAG TGATTCTGGC AACCGAATAT GAGCTAATCG TCTGCCCGGA GACGCGCGTC
GAGCGCCGCA TCTTCACCCA CCGACAGGTC GACGGCGCTA TCGTTTTCGA TACGAGTATC
ACTGATGAGC AGATATTGCG GTTAGCCGGG CCGAAATTCC CGATCGTGGT GATGGATCGG
CAGCTCGAAG CGGAGCATGT CTTCCCGCTG TTGCTCGATA ACCGGCAAGG CGTCGCCCAA
GCCTTCGCCC ATCTCTACCG GCAAGGGTTG CGCCACTTGG CCTACGTGGC CGGCGCGCCC
GACTCGTTTG ACAATAACGA ACGTATGCAG GCGTTTCTCA ACGAAGCCGC CCGCCACCAG
CTCTCGGTGC GGGTCTATCC CGGCAATTTC ACCGAGCAAT CGGGCTACGC GGCGGCGCAG
CGGATTATCG CTGAAGGCGA TCTGCCGGAA GGAGTCTTTT GCGCCAATGA CCAGATGGCG
ATCGGCTTTA TGCGAGCAAT GCACGAACAT GGCTTGGAAG CGCCGCGCGA CATTGCGGTG
GTCGGCTGCG ACGATATTCT ACTTGCACGC TACGTGCAAC CTCCGCTCTC GACTATTGGT
GCGTCGCGAC GGGAATGGGG TGGTACGGCT GCCCAATGGC TCATGCGCTA CCTTGAGCAT
GAAAAGGTCT TTCCACCACA ACGCATTCCC ACTTCGTTTA TCGCTCGGGC ATCATCGCTT
AAACATCCGG TCTCGTTGGA GTAG
 
Protein sequence
MPTIKDVARR AGVSVTAASY ALNRTGTISE ETRQRVLQAA EELNYHPNAF ARHLKARRSR 
TIGVFITRFA GAFYEEILDG IHEVILATEY ELIVCPETRV ERRIFTHRQV DGAIVFDTSI
TDEQILRLAG PKFPIVVMDR QLEAEHVFPL LLDNRQGVAQ AFAHLYRQGL RHLAYVAGAP
DSFDNNERMQ AFLNEAARHQ LSVRVYPGNF TEQSGYAAAQ RIIAEGDLPE GVFCANDQMA
IGFMRAMHEH GLEAPRDIAV VGCDDILLAR YVQPPLSTIG ASRREWGGTA AQWLMRYLEH
EKVFPPQRIP TSFIARASSL KHPVSLE