Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0050 |
Symbol | |
ID | 7269047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 72641 |
End bp | 73261 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643564923 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002461439 |
Protein GI | 219847006 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.552448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.767054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGGAC CAATTATCGA TCTATCACTC TACGACGATG AAGAAGCGCT CTTAGCCGGG TTACGTCGTG GTGATCCAGA TGCTTGTACG TGCTTTGTCA AGCGCTTCGC GCCGCTTGTC TATGCACGTG CATTGCACCT GCTCGGTGAT GCAGACGATG CCGAGAACGT TTTGCAGACT ACATTTATCA AGGCCTGTGC AGCCCTTCCT GAGTATACCG GATCCGGTAG CTTGCGAAGT TGGCTGTACC GGATTGCGTC AAATGAAGGA CTGATGCTCT TACGCCAAAA GCGGGCGCAT GTTGGTCTTG ATACCGTCGG CGAGATCGGG TCGGACGAGA CGACGAGTCA GTTTAAGACA ATATCGCGAT GGGCAATCGA TCCGGCGCGC AGTGTGTTAG ACGGTGAATT GCGACGCGAA ATTGCCAAAG CCATCGCTGA ATTGCCCGAT CCGTTGCGAG CCGTCATTGT ATTACGAGAT ATTGAACAGT TAAGCACAGA GGAGACTGCC GAGCGGCTCG GCATCAGCCC CAGCGCGGTC AAGGTTCGGT TACATCGCGC ACGGCTACGG TTGCGCGAGG CGCTGGCTCG TTATATGGAA ACGACAGGTG AAGCCGATTG A
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Protein sequence | MPGPIIDLSL YDDEEALLAG LRRGDPDACT CFVKRFAPLV YARALHLLGD ADDAENVLQT TFIKACAALP EYTGSGSLRS WLYRIASNEG LMLLRQKRAH VGLDTVGEIG SDETTSQFKT ISRWAIDPAR SVLDGELRRE IAKAIAELPD PLRAVIVLRD IEQLSTEETA ERLGISPSAV KVRLHRARLR LREALARYME TTGEAD
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