Gene Cagg_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0027 
Symbol 
ID7269024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp42950 
End bp43984 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID643564900 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002461416 
Protein GI219846983 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTG TTGCGATTGT CGGTGCCGGC ATGGCCGGAT TAGCAGCCGC CCGTGCATTG 
GCGACTGCCG ACTTTACGCC GGTTGTGTTC GAGAAGAGTC GGGGCGTCGG TGGACGTGCT
GCCACCCGCC GTATCGGCGA TATACGTTTT GATCACGGCG CTCAATATGT GAAAACGCCT
ACCCAACCAC TCCGCGACCT GATCGTCGCA ACCGGCGACG CGGTGACAAT CGATCGCCCG
GTGTGGGTGT TGACTTCGAC CGATCAGATT ACGCCCGGTG ACCCATCGCA CGCCGATGAG
GAAAAATGGA CGTGGCCAAG CGGGATTACG CGCTTGGCGA AACACCTTGC CGATGGCCTG
ACCGTACAGT TGGAGACGAC TGTTGCCCGT ATTGATGTCT GCGACGATGA CTACCGACTG
ACGGCTGCTG ATGGCCGTGA TCTTGGCTGC TTCGCGGCGG TCTTACTGAC TGCCCCTGCA
CCTCAGACGG TCGCAATCCT TGCCGCCGGC GATCTACCGC CGCAGGTCGC TACCCTCTGC
GCAAGTCTAC AGACCGTTCG GTATCGGCGT TCGATCAGCA TCACCGTGGC CTATCCCCGT
CGCCCAGCCG TACCATGGTA TGCACTGGTC AATGCTGATC GCCAACACTC GATCAGTTGG
TTGGCATGTG AACACGACAA ACCGGGCCGC GCCCCCGCCG GTTGCGGTGT CTTGATCGCC
CAAATGAGCG ATACTTGGGC GACGATGCAC TGGGATGCGG TGCAGAAGGG TACGCTGATG
CCGACCGAAC CGCTACCATC GCCTGTCAGT GAGGTGCTCA CTGCCATCCG GCATCTCGTC
GGTGATCTCG GCGAACCGTT GTGGGTGAAC CTGCAACGTT GGCGTTACGC CCTTCCCGAT
ATGGCCACCC CACTGACCGG TATTGATCGA CTCGTCATCG CCGGCGACAT GGTTGCCGGA
CAGGGAAGGG TTCATCTGGC GATTGAAAGT GGTTGGCGTG CCGCCAATCA GATCCGCGCA
TTGCTGACGG AGTAG
 
Protein sequence
MKSVAIVGAG MAGLAAARAL ATADFTPVVF EKSRGVGGRA ATRRIGDIRF DHGAQYVKTP 
TQPLRDLIVA TGDAVTIDRP VWVLTSTDQI TPGDPSHADE EKWTWPSGIT RLAKHLADGL
TVQLETTVAR IDVCDDDYRL TAADGRDLGC FAAVLLTAPA PQTVAILAAG DLPPQVATLC
ASLQTVRYRR SISITVAYPR RPAVPWYALV NADRQHSISW LACEHDKPGR APAGCGVLIA
QMSDTWATMH WDAVQKGTLM PTEPLPSPVS EVLTAIRHLV GDLGEPLWVN LQRWRYALPD
MATPLTGIDR LVIAGDMVAG QGRVHLAIES GWRAANQIRA LLTE