Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6600 |
Symbol | |
ID | 8337964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7608621 |
End bp | 7610093 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959694 |
Product | amino acid permease-associated region |
Protein accession | YP_003117287 |
Protein GI | 256395723 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGA TGGATGTCCC CCTTGAGGGG GCGGGCGGGA GGCGGCGCGC AGCCGTCGCG AAGGCGGTCG CCAAGCCGCG CCTGACGTGG CTGACGCTCG CGTTCATGAC CACCAGTTCG GTGGCCAGCC TGCGGGCCTC GCCGACGATG GCCGTCTACG GTCTGGCCTG CATCTTCCTG TACGTCGTGC CGGCGATCGT GTTCCTGCTG CCCACGGCGC TGGTCTCGGC CGAGTTGGCG TCGGGCTGGG ACGGCGGGGT CTACAACTGG GTCGCCCAAG GCTTGTCGAA GCGGCTGGGC TTCCTGGCGG TGTGGTGCCA GTTCGCGATG ACGATCTTCT ACTATCCGAC GCTGCTCGGG TATGTCGCCA GCACCATCGC CTACGTGATC AATCCCCAGC TGGCCGACAA CGGCCTCTAC ACCGCGATCG TCATCATGGT CGTGTACTGG TCCGGGGTGT GGATCTCCTC GCGCGGGACC AGCGGGGTCG GCGGGATGGC CTCGTTCGGG CTGATCATCG GCACGCTGAT CCCCGGCGTA CTGCTGGTCG TGCTGGGCAT CGTCTTCCTC GGCCAGGGCA ACCCCTCCGC CGCGCCGATG AACGCCGGCT CCATCTTCCC GCAATGGACG GGAGTGGCGA GCCTGGTGCT GATCGTCAAC AACTTCCTGA GCTACTCCGG CATGGAGATG AACGCGGTGC ACGTCTCCTC GCTGAAGAAC CCGGGCAAGG AGTTCCCCAA GTCGATGTTC CTGGCGATGG GACTGGTGCT GCTGATCTTC ATCCTGCCGG CGCTGGCGAT CAGCTGGGTG GTGCCCTCGG CGCAGCTGAG TCTCACGGCC GGCGTGATGC AGGCGTTCGA CGCCTTCTTC CAGTACTTCA GCATCGGCTG GCTGACGCCG CTGGTGGCGG TCGGGCTGGT GGCGGCGTCC GTCGGCGGCA TGCTGACCTG GCTGGCCGGA CCGTCCAAAG GGCTGTTGAT GATCTCGCGC CAGGAGGGCT ACCTGCCTCC GTACCTGCAG AAGCTCAACA AGAACGGCGT CCAGCAGAAC ATCCTGGTCG CCCAGGGCGC CGTGACCACG CTGATCGCGC TGATGTACGC GCTGATCCCG AGCGTGTCCG GGGCGTACTG GATCTTCTCG GTGATCACGA CGCAGGTCTA CCTGATCATG TACCTCCTGA TGTTCGTCGC GGCGATGCGC CTGCGCAAGC TGCAGCCGGA CCATCCGCGC GGCTTCCGCG CCCCGCTGCT CGGACCCCTG TGCGTGATGG GTCTGCTCGC CTCGGCGGCG GCGATGGTCA TCGGGTTCGT GCCCTCCTCG CAGTTCGGCA GCGGCAGCGT CTGGTCCTAC GTGCTGATCA TCGCCGGCGG CCTGCTCCTG CTCGGGTTCC TCATCCCGTT CGGGTTCCTC AAGGCGCGCA AACCCTCCTG GCGCCGCGCC GATGGGGAGC CGGCAGCCGA GGGCGGTGCG TGA
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Protein sequence | MTSMDVPLEG AGGRRRAAVA KAVAKPRLTW LTLAFMTTSS VASLRASPTM AVYGLACIFL YVVPAIVFLL PTALVSAELA SGWDGGVYNW VAQGLSKRLG FLAVWCQFAM TIFYYPTLLG YVASTIAYVI NPQLADNGLY TAIVIMVVYW SGVWISSRGT SGVGGMASFG LIIGTLIPGV LLVVLGIVFL GQGNPSAAPM NAGSIFPQWT GVASLVLIVN NFLSYSGMEM NAVHVSSLKN PGKEFPKSMF LAMGLVLLIF ILPALAISWV VPSAQLSLTA GVMQAFDAFF QYFSIGWLTP LVAVGLVAAS VGGMLTWLAG PSKGLLMISR QEGYLPPYLQ KLNKNGVQQN ILVAQGAVTT LIALMYALIP SVSGAYWIFS VITTQVYLIM YLLMFVAAMR LRKLQPDHPR GFRAPLLGPL CVMGLLASAA AMVIGFVPSS QFGSGSVWSY VLIIAGGLLL LGFLIPFGFL KARKPSWRRA DGEPAAEGGA
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