Gene Caci_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5396 
Symbol 
ID8336750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6219976 
End bp6220884 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID644958494 
Productprotein of unknown function DUF75 
Protein accessionYP_003116096 
Protein GI256394532 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.380305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.382515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TCGACGGCAA TATGCCCGAT TTGGTAGATC CTGTGGCGAT ATGTGCATTC 
GAGGGGTGGA ACGACGCCGG GGAGGCTGCG TCCAACGCGG TGAAGCACCT GGCGGAGGCC
TATGCCGGTG CGGGGCGGAT GTTCGCGGCG CTGGACGGCG AGGACTATTA CGACTACCAG
GTGCACCGGC CGATGGTCGC CGCGGTGGAC GACCGGCGGC AGGTGATCTG GCCCACGACG
CGCTTCTCGG TGGTGCGGGC GCCGGCGCGG CTGCTGCCCG GCGACGCGCA CGAGGAGCCG
CGGGACCTGG TGCTGGTGCA CGGCGTGGAG CCGAACATGC GCTGGCGCTC GTTCTGCGAG
GAGGTGCTCG GGCTGGCGCG GGATCTGGGC GTCGGGCAGA TCATCACGCT CGGCGCGTAC
CTCGCCGACG TGCCCCACAC CCGGCCGACG CCGGTGACCG GCACCAGCTC GGACGAGGCG
TACCAGGCGC TGTTCGACGT GGAGCCGCCC ACGTACGAGG GACCGGTGGG GATCACCGGA
GTCTTCCAGG AGGCCTGCCA CCACGCGGGC ATCCCGCTGA TGTCGTTCTG GGCCGCGGTG
CCGCACTACG TGGCGCACCC GCCGGTGCCG AAGGCGACGC TGGCACTGCT GCGGCGGCTG
GAGGACGTGC TGGACCTGTC GGTGCCGACG AAGCGGCTCG CCGAGGAGGC GCAGTCGTGG
GAGGCCGGGG TCGACGAGCT GGCCGAGAAC GACGCCGAAG TCGGCGAGTA CGTCCGGACG
CTGGAAGAGC AGCGGGACAA CGAGGACGCC GCGGACTCGC CGGAGGCCAG CGGCGAGGCG
ATCGCGCGGG AGTTCGAGCG GTACCTGCGA CGGCAGGAGC GGCGACGGGG GTCGTCGGAG
GAAGGCTAG
 
Protein sequence
MIEFDGNMPD LVDPVAICAF EGWNDAGEAA SNAVKHLAEA YAGAGRMFAA LDGEDYYDYQ 
VHRPMVAAVD DRRQVIWPTT RFSVVRAPAR LLPGDAHEEP RDLVLVHGVE PNMRWRSFCE
EVLGLARDLG VGQIITLGAY LADVPHTRPT PVTGTSSDEA YQALFDVEPP TYEGPVGITG
VFQEACHHAG IPLMSFWAAV PHYVAHPPVP KATLALLRRL EDVLDLSVPT KRLAEEAQSW
EAGVDELAEN DAEVGEYVRT LEEQRDNEDA ADSPEASGEA IAREFERYLR RQERRRGSSE
EG