Gene Caci_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5040 
Symbol 
ID8336394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5779380 
End bp5781962 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content68% 
IMG OID644958139 
Productaminopeptidase N 
Protein accessionYP_003115741 
Protein GI256394177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID[TIGR02412] aminopeptidase N, Streptomyces lividans type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCGCG GTACGAACTT GGCCCGTGAG GAAGCGCGCG ACCGCGCGGC GTTGGTCGAC 
GTCCAGTCCT ACGACGTGCG GCTGGACTGG TCGGGAGCGC CCGACCCGCA GGCGGCGACC
TATCAGTCGG AGACGGTGGT CCTGTTCACC GCGCGGACCC CGGGTGCGTC GACCTTCATC
GACCTGGTCG CCCCGAACGT CCGCGCGATC ACGCTCAACG GCCGGGAGGT GGATCCCGCC
GAGGCGTTCC AGGACAGCCG GATCGCGCTG ACGGAGCTGC GGGAGCACAA CGAGCTGCGG
GTGGTCGCCG ACTGCGCCTA CATGAACACC GGCGAGGGTC TGCACCGGAT GATCGACCCG
GTCGACGGCG AGGCGTATCT GTACACGCAG TTCGGGGCGC CGGAATCGCG CCGGGCGTTC
CCGGTGTTCG AGCAGCCGGA TCTGAAGGCG ACCTTCGCCT TCACCATTCA GGCGCCGGAG
TCCTGGCTGC TCTTCTCGAA CTCCCCCACG CCGGCGCCGG AGTCGCGCGG CGACGGCACG
GCCGTGTGGG CTTTCGAGCC GACGCCCCGG ATCTCCTCGT ATATCACCGC CCTGGTGGGC
GGGAAGTACC ACGTCGCGCG GTCGGAGCAC ACGACCAAGC GCGGGCAGAA GATCCCGCTG
GCGGTGGGGG TCCGTGCGTC GCTGGCCGAG TACCTGCGCC CCGAGGAGAT CTTCGAGATC
ACCAAGCAGG GCTTCGACTT CTACACCGAG AAGTTCGACC GCGACTACCC CTTCGCGAAG
TACGACCAGC TGTTCGTGCC GGAGTTCAAT TTCGGCGCGA TGGAGAACGC CGGCTGCGTC
ACCTTCCGCG AAGAGATGAT CTTCCGGTCG AAGGTCACCG ACGCCGCCTA CGAGCAGCGC
GGCTACGTCA TCCTGCACGA GATGGCGCAC ATGTGGTTCG GCGACCTGGT CACCATGCAG
TGGTGGAACG ACCTGTGGCT CAACGAGTCC TTCGCGACCT TCACCTCCTT CTACGCACAG
GTCGCCGCGA CCCGCTTCAA GGACGCCTGG ACCACCTTCG CCAACCGTGA CAAGTCCTGG
GGCTACCGCC AGGACCAGTT ACCCAGCACG CACCCGATCG TCGCCGAAAT CCGCGACCTC
GAAGACGTGA TGGTCAACCT CGATGGCATC ACCTACGCCA AGGGCGCCTC GGTCCTGAAG
CAGTTAGCCG CTTGGGTCGG CGACGACCAC TTCTTCGAGG GCGTACGTCG TTACTTCACG
CGCCATGCCT GGGGCAACAC CACGTTGGCG GACCTGCTGA GCGCGCTGGA GGAGACCTCC
GGGCGCGACC TGAAGGAATG GTCGAAGCTC TGGCTGGAAA CCGCCGGGCC GAACACGCTG
CGACCCGTCT ACGAGGTCGA CGACGCTGGA CGATTCACCT CCTTCGCCGT AGAGCAGGAG
GGCTTCTCCG AGCAGTTCCC GACGCTGCGC CCGCACCGTT TGGCGATCGG TCTGTACAAC
ATGGTCGACG GCGCCCTGGT CCGCACCGAC CGGGTCGAAC TCGACGTCAC CGGCGCCTCC
ACCGAGGTCG CCGACCTGAT CGGCAAAGCC CGCCCCGCGC TGGTCCTGCT CAACGACGAC
GACCTCACCT ACGCCAAGAT CCGCCTCGAC GAGCACTCGA TGGCGACCCT GGTCGACCAC
GTCGGTGACT TCGCCGAGTC CCTGCCACGC ACCCTGTGCT GGAGCGCCGC CTGGGACATG
CTGCGCAACG CCGAACTCGC CGCGCGCGAC TACCTCACCC TGGTCCTGCG CGGCATCGGC
CGGGAATCCG ACATCGGCGT CTCCCAGCTG CTCCAGCGAC AGGCCAAGTC CTCCGTCGAG
CTGTTCGCCG ACCCGGCGTG GCGCCCCACC GGCCAGGCGC TGCTCGCCGA CGCCTGCTGG
GAACACCTGA ACGCCGTCGA GCCCGGCTCG GATTTCCAAC TCGCCTGGGC CCGCTCCCTC
GCAGAGAATG CGACCACTGA CGACCAGTTG TCCTCTATCG CAGGCTTACT GGACGGCTCG
ATCGTGCTCG AAGGTCTGAG CATCGACACC GAGCTGCGCT GGACGCTGCT GACAGCCCTG
GTCGTCGGCG GCAAGGCAGA CGTGCCGCAG ATCGAGGCGG AGCTGGCGCG CGACAAGACC
GCCACCGGCG AGCGGTACGC CCTCCAAGCA CGTGCGGCCC GTCCGACCGC CGCAGCCAAG
GCTGAGGCGT GGGCATCGGT GGTCGACAGC GACACCCTGG CCAACCGCAC CGTCGCTTCC
GTGATCGCCG GCTTCCAAGC GGTCCCCGCC GACAAGCGCG AGGAACTGCT CAAGCCGTAC
GCGGCGAAGT ACTTCACGGC TGTTGAGGGC ACATGGGAGT CCCGCACCCA CGAGATCGCC
GCTCAGATCG CCAGCGGCCT GTATCCGTCG TTCGTGGTCG AACAAGCCAC CCTGGACGCC
ACCGATGCCT GGCTGGCCGA CCGGCAGCCG GTGCCGGCGC TCCGGCGGCT GATGCTGGAG
GCCGCTGACA CCGTCGCGCG CTGCTTGAAG GCACAGGAGA AGGACCGCGC CGCAGGGTAC
TGA
 
Protein sequence
MVRGTNLARE EARDRAALVD VQSYDVRLDW SGAPDPQAAT YQSETVVLFT ARTPGASTFI 
DLVAPNVRAI TLNGREVDPA EAFQDSRIAL TELREHNELR VVADCAYMNT GEGLHRMIDP
VDGEAYLYTQ FGAPESRRAF PVFEQPDLKA TFAFTIQAPE SWLLFSNSPT PAPESRGDGT
AVWAFEPTPR ISSYITALVG GKYHVARSEH TTKRGQKIPL AVGVRASLAE YLRPEEIFEI
TKQGFDFYTE KFDRDYPFAK YDQLFVPEFN FGAMENAGCV TFREEMIFRS KVTDAAYEQR
GYVILHEMAH MWFGDLVTMQ WWNDLWLNES FATFTSFYAQ VAATRFKDAW TTFANRDKSW
GYRQDQLPST HPIVAEIRDL EDVMVNLDGI TYAKGASVLK QLAAWVGDDH FFEGVRRYFT
RHAWGNTTLA DLLSALEETS GRDLKEWSKL WLETAGPNTL RPVYEVDDAG RFTSFAVEQE
GFSEQFPTLR PHRLAIGLYN MVDGALVRTD RVELDVTGAS TEVADLIGKA RPALVLLNDD
DLTYAKIRLD EHSMATLVDH VGDFAESLPR TLCWSAAWDM LRNAELAARD YLTLVLRGIG
RESDIGVSQL LQRQAKSSVE LFADPAWRPT GQALLADACW EHLNAVEPGS DFQLAWARSL
AENATTDDQL SSIAGLLDGS IVLEGLSIDT ELRWTLLTAL VVGGKADVPQ IEAELARDKT
ATGERYALQA RAARPTAAAK AEAWASVVDS DTLANRTVAS VIAGFQAVPA DKREELLKPY
AAKYFTAVEG TWESRTHEIA AQIASGLYPS FVVEQATLDA TDAWLADRQP VPALRRLMLE
AADTVARCLK AQEKDRAAGY