| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2378 |
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| Symbol | alaS |
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| ID | 8333727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2694752 |
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| End bp | 2697421 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955531 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003113137 |
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| Protein GI | 256391573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCCG CGGAGATCCA CCGCCGCTGG CTCGACTTCT TCCAGAAGAA GGGCCACACG
GTCGTCCCGT CGGCGTCGCT CATCTCGAAC GACCCGACCA CCCTGCTCAC CATCGCGGGC
ATGGCCCCGT TCAAGCCGTA CTTCCTCGGC GAGCAGCCCG CGCCCTGGCC GCGCGCGACC
TCGGTCCAGA AGTGCGTGCG CACGCTGGAC ATCGAAGAGG TCGGCAAGAC CACGCGGCAC
GGCTCGTTCT TCCAGATGTG CGGCAACTTC TCCTTCGGCG ACTACTTCAA GGAGACCGCC
ATCCCGATGG CGTGGGAGCT GTGCACCACG CCGGTCTCCG AGGGCGGCTT CGGCCTGGAC
CCGGAGAAGA TCTGGGTCAC CGTCTACCTC GACGACGACG AGGCGGAGGA GATCTGGAAG
AAGGCGGGCT TCCCGGCCGA GCGCATCCAG CGCCTCGGCA TGAAGGAGAA CTACTGGTCG
ATGGGCGTGC CCGGGCCCTG TGGCCCGTGC TCGGAGCTCT TCTACGACCG CGGCCCGGAG
TTCGGCGAGG CCGGCGGCCC GGCGGTGAAC GACGAGCGCT ACATGGAGTT CTGGAACCTG
GTCTTCATGC AGTTCGAGCG CGGCGCGGGC GGCGACAAGG GCGGCTTCCC GATCCTCGGC
GAGCTCCCCA GCAAGTCCAT CGACACCGGC CTGGGCCTGG AGCGCCTGGC GACGATCCTG
CAGGGCGTCA ACAACCTGTA TGAGATCGAC ACCTCGCGCG CGATCCTGGA CAAGGCGGCG
TCCATCGCGG GTGTCACCTA CGGCCGGGAC ACCAGGACCG ACGTCTCGCT GCGCGTGGTC
ACCGACCACG TGAAGACCGC GACGATGATG ATCGGCGACG GCATCACCCC CGGCAACGAG
GGCCGCGGCT ACGTGCTGCG CCGCCTGATG CGCCGCGCGA TCCGCAACAT GCGCCTGCTC
GGCGCGCACG GCGCGACCAT CAAGGACCTC GTCGAGATCA CCATAGGGGC GATGGGCCAG
GCCTACCCCG AGCTGATCGC GGACGCCTCG CGCATCGTCG CGGTCGCGGT CGCCGAGGAG
ACCTCCTTCC TGCAGACGCT GCGCACCGGC TCGGCGATGT TCGAGACCGT CGCGGACGAG
GCGAAGGCCT CCGGCAGCGC GGTCTTCTCC GGCGACCAGG CGTTCAAGCT GCACGACACC
TTCGGCTTCC CGATCGACCT GACCCTGGAG ATGGCGTCCG AGGCGGGTCT GAGCGTCGAC
GAAGAGGGCT TCCGCCGCTT GATGAAGGAG CAGCGGGACC AGGCGAAGGC GGACGCGCGG
GCGAAGAAGA CCGGCCACGC GGACATGTCG GCGTACCGGG AGCTGCTCGA CGCGGCGGGC
CCGTCGGCGT TCACCGGCTA CCACGAGGTC TCCTCCGAGG GCCTACTGAA GGCGATGCTG
GTCAACGGCC AGGTCGGCAG CTCGGCCAAG CCCGGCGACG AGGTGGAGCT GGTCCTGGAC
CGCACCCCCT TCTACGCGGA GGGCGGCGGC CAGCTGGCCG ACCACGGTCT GATCCGGCTC
GGCAACGGCG CGCTGGCCGA GGTCGTGGAT GTGCAAAAGC CCGTCGGCGA CCTGATCGCG
CACCGGGCGA TCGTGCGCGA CGGCGAGGTT GTGCTGGGCG CCGAGGCGTG GGGCGAGGTG
GACACCGCGC GCCGCGCGGC GATCTCCCGC GCGCACACCG CGACGCACAT GGTTCACAAG
GCGTTCCGTG AGCTGCTCGG CGAGACCGCG ACCCAGGCGG GTTCGGAGAA CTCCCCCGGC
CGCTTCCGCT TCGACTTCGC CTCCCCGGGC GCGGTCCCGC ACTCGGTGCT GGCGGACGTC
GAGCAGCGGG TCAACGAGCT GCTGATCGAC GACCTGTCGG TCACCGCGCA GGTGATGAGC
CAGCCCGAGG CCAAGGCGAT GGGCGCGATG GCGCTGTTCG GCGAGAAGTA CGGCGACCGG
GTCCGCGTGG TCTCGGTCGG GGAGTGGGCG CACGAGCTGT GCGGCGGCAC GCACGTGGAC
AACACCGGCC GCCTCGGTCT GGTGAAGCTG CTGTCCGAGT CCTCGATCGG CTCCGGCGTG
CGCCGCGTCG AGGCGCTGGT GGGCACCGAC GCGTACAACT TCCTCGCGCG CGAGCACGTC
CTGGTTTCGC AGCTCGCGGA GGTCGTGAAG GCGCGCCCGG AGGAACTGGT CGAGCGGGTC
GGCGGCATCA TGACCAAGCT GCGGGACGCG GAGAAGGAGA TCTCCGCGCT CAAGGCGGGG
CAGCTGCTGC AGATCGCGGG CTCGCTGGTG GACGGCGCGA GCGACGTCCA CGGCGTCGCG
GTGGTCACGC ACCAGGCGCC CGACGGCGCG TCCGCGGACG ATCTGCGCAA GCTCGTGCTG
GACGTGCGCG GCCGGCTCGG CACGCGCCCG GCGGTGGTCG CGGTCGCGGC CGCGGCGGGG
GAGCGGCCGG TGGTGGTCAT CGCGACCAAC GAGGGCTCGC GCGGGCTTGG TCTGAAGGCG
GGCGAGCTGG TGCGCTCGGC GGCCAAGACG CTCGGCGGCG GCGGAGGCGG CAAGGACGAC
GTCGCGCAGG GCGGCGGCAC CGACGCCACG GCCATCCCGG CGGCGCTGGA GGGCGTCGGC
AGGGCGGTGG CGGAGAAGGT GGCCGCGTAG
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| Protein sequence | MESAEIHRRW LDFFQKKGHT VVPSASLISN DPTTLLTIAG MAPFKPYFLG EQPAPWPRAT
SVQKCVRTLD IEEVGKTTRH GSFFQMCGNF SFGDYFKETA IPMAWELCTT PVSEGGFGLD
PEKIWVTVYL DDDEAEEIWK KAGFPAERIQ RLGMKENYWS MGVPGPCGPC SELFYDRGPE
FGEAGGPAVN DERYMEFWNL VFMQFERGAG GDKGGFPILG ELPSKSIDTG LGLERLATIL
QGVNNLYEID TSRAILDKAA SIAGVTYGRD TRTDVSLRVV TDHVKTATMM IGDGITPGNE
GRGYVLRRLM RRAIRNMRLL GAHGATIKDL VEITIGAMGQ AYPELIADAS RIVAVAVAEE
TSFLQTLRTG SAMFETVADE AKASGSAVFS GDQAFKLHDT FGFPIDLTLE MASEAGLSVD
EEGFRRLMKE QRDQAKADAR AKKTGHADMS AYRELLDAAG PSAFTGYHEV SSEGLLKAML
VNGQVGSSAK PGDEVELVLD RTPFYAEGGG QLADHGLIRL GNGALAEVVD VQKPVGDLIA
HRAIVRDGEV VLGAEAWGEV DTARRAAISR AHTATHMVHK AFRELLGETA TQAGSENSPG
RFRFDFASPG AVPHSVLADV EQRVNELLID DLSVTAQVMS QPEAKAMGAM ALFGEKYGDR
VRVVSVGEWA HELCGGTHVD NTGRLGLVKL LSESSIGSGV RRVEALVGTD AYNFLAREHV
LVSQLAEVVK ARPEELVERV GGIMTKLRDA EKEISALKAG QLLQIAGSLV DGASDVHGVA
VVTHQAPDGA SADDLRKLVL DVRGRLGTRP AVVAVAAAAG ERPVVVIATN EGSRGLGLKA
GELVRSAAKT LGGGGGGKDD VAQGGGTDAT AIPAALEGVG RAVAEKVAA
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