| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1433 |
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| Symbol | |
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| ID | 8332772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1630647 |
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| End bp | 1633658 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954581 |
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| Product | glycoside hydrolase family 2 TIM barrel |
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| Protein accession | YP_003112197 |
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| Protein GI | 256390633 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTG ACACTGAGAC CTCCTACCAG CGTTTCGCCT ACGTCGAGGA CCGCTCCCCC
GGGACCGGCC GGCTCGCACC GCGCGCGGCG TTCGCCTCCG ACGCCGCGGT CCTCGGGCTC
GACGGCCGGT GGCGCTTCCG CCTGGCCGCC GGGCTGCACG ACACGACAGA GGCATTCCAG
GCGCCGGACT TCGACGACGC CGCCTGGGAC GAGATCGCCG TCCCGTCGTG CTGGCAGATG
GACGGCCTGC CCGGCGAGCC GCGCTACGGC GCGCCGGCGT ACACGAACGT CACCTATCCG
ATCCCGCTGA ACCCGCCGCA CGTCCCGCGC GAGAACCCGA CCGGCGAGTA CCGCTACGCC
TTCGACGTGC CCGGCGACTT CCACGCCTCG GGTGCGCGCT TACGCTTCGA AGGCGTCGAT
TCCTGCTTCG CGGTCTGGCT GAACGGCGCG CTGCTCGGCG ACGGCAAGGG CTCGCGGCTG
CCCACCGAGT TCGACGTCTC CTCCGTGCTG GAACCGGGGC GGCAGAACGT GATCGCGGTC
CGTGTCCACC AATGGTCGGC GGGAACCTAC CTGGAAGACC AGGACATGTG GTGGCTGTCC
GGCATCTTCC GCTCGGCGGC GGTCCTGGAG CGGCCGCGCG AGGGTATCTC AGACTTCTTC
GTCCACGCCG ACTACGACCC GGCGACCGGC GCCGGCACGC TGCGGATCGA CGTCACCGGC
ACGGCCCGCC TCACCGTCCC CGACCTCGGC ATCGCCGACG CCGACCCGGC CGGGCCGTTC
GTCATCAGGC GGGTCGAGCC CTGGAGCGAC GAGCGGCCGC GCCTGTACGC CGGCGAGCTG
GTCAGCGCCG GCGAGCGCGT ACCAATCCGT ATCGGCTTCC GCCGCGTCGA GGCCGCCGAC
GGCGTCCTGC GCGCCAACGG CAAGCCGCTG AAGTTCCGCG GCGTGAACCG CCACGAGTGG
CATCCGCTCA CCGGCCGCAC GCTGAGCCCG GAGACGATGC TGGAGGACGT GCTGCTGATG
AAGCGGCACA ACATCAACGC CGTCCGCACC TCGCACTACC CGCCGGACTC CCGCTTCCTG
GACCTGTGCG ACGAATACGG GCTCTGGGTC ATCGACGAGT GCGACCTGGA GACGCACGGC
TTCGCCGTGG TCGGCTGGCG CGAGAACCCC GTCGCCGACC CCGCGTGGCG CGAGGCGCTG
TTGGACCGCG CCGAGCGCAT GGTCGAGCGG GACAAGAACC ACCCGAGCGT GGTGATCTGG
TCGCTGGGCA ACGAATGCGG CAGCGGCGAG AACCTGGCCG CGATGGCCGC GTGGATCCGG
GAGCGCAACC CCGAGCGCCT GATCCATTAC GAGGGCGACC ACGACTCCTC CTACGTCGAC
CTCTACTCGC GGATGTACTC CGACTACGAC CACGTCGCCG CCATCGGGGT GTATCAGGAG
CCGACGACGG TCGATCCGAC GGCCGACGCG CACCGGCGCT CCATCCCCTT CATGCTCTGC
GAATTCGCCC ACGCGATGGG CAATGGACCC GGCGGCCTGC TGGAATACCG CGACCTGTTC
GAGGCCCATC CCCGGCTGGC CGGCGGCTTC GTCTGGGAGT GGATCGACCA CGGCGTCGCG
CAGGGCTCGC ACTACGCCTA CGGCGGCGAC TTCGGCGAGC GCGTGCACGA CGGCAACTTC
GTCGCCGACG GCCTGCTCTT CCCGGACCGC ACGCCCTCGC CGGGTCTGCT GGAATACGCC
AAGCTCTGCG AGCCGGTCCG CATCGAGGGC GACACCGTTC GCAACCTGCA CCACAGCCGG
GACACCGGAT ATCTGCGCTG GCGCTGGCGA TTGGAGATCG ACGGCGACCT TATCGCGCAG
GACGAACTCC CCGTCCCACC GATCGCCCCC GGCTCGACCT TCCGCCTCCG TTACCCGGAC
GAGCTGACGA AGGCCGCCCA CGCCGCCGGC CCGGGCGAGC GCTGGCTGAC CGTCGAGGCG
GTGCTGTCCG ACGGTGAACC ATGGGCGCCG GCCGGGCACG TGGTCGCCTG GAGCCAGCTC
GAGCTGGGAG ACGCGCCGTT CACCGACGCC GATCCGCTGG TGGACCAAGC GGTCGCGCTG
GCTGCGGACG CGCTGCTGGC GGCGACCGCC GTCGGCGGCA GCGCGATCGA CCGCGGCGAC
GCGGCGGCCG ATTACCTGAC GCCGCAACGC CTCGGCGACA CCGTCACCCT GGGACCGGCC
TCCTTCGACG CCTCCTCCGG CGAGCTGCTG GGCTTGGCAG GGCTGGCGAT CGACGGCTTC
GCCCTGGATC TGTGGCGCGC TCCGATCGAC AACGAACGCT GGTCCTCCTT CACCGCGCCG
CCGTTGGTCG AGGCGTGGCG GACGGCCGGC CTGGACCGGC TGGAGCACGA CGTCCTGGCG
GTCGAGTCCG AGCCCGACGC GTTCACCGTC ACGACGCGCG TCGGTCCGGT CGGCCGCGAC
CACCATCTCG ACGTCGTCTA CGTCTGGTCG GCGACGGACT CCCGGCTGTG CCTGACCGTC
CACGTCGCGC CGAACCGGCC TTGGCCGTGC CCGATCCCCC GGCTCGGCGT GTCCTTCCAG
CTGCCCGGCG AGCTGAATAC CGTGAGCTGG TACGGACTCG GGCCCGGCGA GGCCTACCGG
GACAGCCGGT CGGCGGTGCG GATCGGGCAT TATCAGAGCT CTGCCGCCGA TCTGCAGACG
CCCTACCTTT TCCCGCAGGA GAACGGGAAC CGCCACCAGG TGCGCAGAGC CTCGCTCACG
CGTCCCGACG GCACCGGGCT GCTGCTCTCC GGCGCGCCGC ACTTCGATCT CGCCGTGCGG
CCGTGGAGCA GCGCCGCAAT GGAAGCCGCG CGCCATCCCG ACGAGCTGAT TCCCTCCGGG
CGGCTGCACG TCCAGGTGGA CCACGCGCAC CACGGCATCG GCAGTGCGTC GTGCGGCCAC
CCCCTGCAGC CCCGCCATCG CCTCGAGGCC GGCCGCGCGA GCTTTGCCTT CACCCTGGAG
GCGCTACAGT AG
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| Protein sequence | MPSDTETSYQ RFAYVEDRSP GTGRLAPRAA FASDAAVLGL DGRWRFRLAA GLHDTTEAFQ
APDFDDAAWD EIAVPSCWQM DGLPGEPRYG APAYTNVTYP IPLNPPHVPR ENPTGEYRYA
FDVPGDFHAS GARLRFEGVD SCFAVWLNGA LLGDGKGSRL PTEFDVSSVL EPGRQNVIAV
RVHQWSAGTY LEDQDMWWLS GIFRSAAVLE RPREGISDFF VHADYDPATG AGTLRIDVTG
TARLTVPDLG IADADPAGPF VIRRVEPWSD ERPRLYAGEL VSAGERVPIR IGFRRVEAAD
GVLRANGKPL KFRGVNRHEW HPLTGRTLSP ETMLEDVLLM KRHNINAVRT SHYPPDSRFL
DLCDEYGLWV IDECDLETHG FAVVGWRENP VADPAWREAL LDRAERMVER DKNHPSVVIW
SLGNECGSGE NLAAMAAWIR ERNPERLIHY EGDHDSSYVD LYSRMYSDYD HVAAIGVYQE
PTTVDPTADA HRRSIPFMLC EFAHAMGNGP GGLLEYRDLF EAHPRLAGGF VWEWIDHGVA
QGSHYAYGGD FGERVHDGNF VADGLLFPDR TPSPGLLEYA KLCEPVRIEG DTVRNLHHSR
DTGYLRWRWR LEIDGDLIAQ DELPVPPIAP GSTFRLRYPD ELTKAAHAAG PGERWLTVEA
VLSDGEPWAP AGHVVAWSQL ELGDAPFTDA DPLVDQAVAL AADALLAATA VGGSAIDRGD
AAADYLTPQR LGDTVTLGPA SFDASSGELL GLAGLAIDGF ALDLWRAPID NERWSSFTAP
PLVEAWRTAG LDRLEHDVLA VESEPDAFTV TTRVGPVGRD HHLDVVYVWS ATDSRLCLTV
HVAPNRPWPC PIPRLGVSFQ LPGELNTVSW YGLGPGEAYR DSRSAVRIGH YQSSAADLQT
PYLFPQENGN RHQVRRASLT RPDGTGLLLS GAPHFDLAVR PWSSAAMEAA RHPDELIPSG
RLHVQVDHAH HGIGSASCGH PLQPRHRLEA GRASFAFTLE ALQ
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