Gene Caci_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0842 
Symbol 
ID8332172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp976502 
End bp978589 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content72% 
IMG OID644953992 
Productserine/threonine protein kinase 
Protein accessionYP_003111616 
Protein GI256390052 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000042013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000202513 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACGCCA ACCGACCCGC TCCGGGACCC GGCGGCTACG GCGGCCTCGG TGCCGGCAGC 
ATCGTGTCGA AGAACATCCA GCCGCTGCTG GAGACCGACC CGCGCCACCT TGGGCCGTAC
TCGGTGCGCG GGCGCCTGGG CCAGGGCGCG ATGGGCAGCG TCTACCTGGG CTTCGCGCCC
ACCGGCCAAG CCTTCGCGCT GAAGGTGCTC CGCCAGGACT TCGCCTCCGA CCGCGACTTC
CGCAAACGCT TCACCCGCGA GATCGCCGCG GCGCGCGCGG TCCACTCCCC GTTCGTGAAC
GCCGTCACCG ACGCCGACCC GAACGCGGCC ACGCCCTGGC TGGCGTCCTA CTTCATCCCC
GGCCCGCCGC TGAGCGCCGC GGTGCAGCTG GCAGGGCCCT TCTCCCCCCG CTCCGTGGCG
CACCTCGGCG TCGGCATCGG ACTGGCCCTG CAGGCGATCC ACACCGCGGG CATCGTCCAC
CGCGACCTGA AGCCGGCCAA CGTCCTGGTC GCCTCCGACG GCCCGCGCGT CATCGACTTC
GGCATAGCCC GCGCCGAGGA CGCCAGCATG CTGACAGCCA CCGGCATGCG CCTGGGCACC
CCCAGCTTCA TGGCCCCGGA ACAGGTGGCG GGCATCGAGG TCGAGGCACC GGCCGACGTC
TGGGCCGTCG GCGGCATGCT CATCTACGCG GCCACCGGCC GCACCCCCTT CGGCAACGGC
GACGCCATGG CCATCCTCTA CCGCGTCGAG AACCACGCCC CGGACCTCCA AGGCCTCGAA
CCAGCCCTGG CCCACATAGC CACCCGCTGC CTGACCAAGG ACCCCACCGC CCGCCCCACC
CCGGCCCAAC TCGTCGACAT GTGCCGCGCC GCCCTCACCA CAGGCCTGGC CGGACACCCA
GCCCTCCGAG GCTCCGACGT CACCGGCTGG CTCCCCTCCG CCATCTCCCG CGACCTGGCC
GCCCGCGCAG TGGAACTCGC GAACATCGGC CACCCACCGC CGACACCCGC GCCCCCACCC
ACCACAGACC CAACCACCGA CCCCGCAGGC AAACCCAGCG GCCTCGGAGG CTTCTTACGA
CGCAAAGCCG GAGGCCAGGC ACCCCAAGCC ACCTCCACAA CGGGGGCGCC CCACACCGGG
CAGCCCAACA GTCGACACAG TCAGGGGACT GCAATGGGTG GCGGGCAGGA TCAGTACGGT
CAGCCGAACA ACCAGACCGG CGGCGGACAG TACGGCCAAC AGCCCTACGA CCCCCAGCCC
TACGACCCCC AGCCCTACGG CGACCAGCCC TACGGCGACC AGCAGGACCC GAACAACACA
GCCAGCGACC AGCCCGGGCA GCAGCAGCCT CCCACGCAGT ACGGCCAGCA GCCTGGTCAG
CAGCCTGGCC AGTACGGTCG GCAGCCCGGC CAGTACGCCC AGCAGCCCGC ACCAGCGTGG
GGACCCTCCG GCCCATCCGG CAGCGACGTC CCCACCATCA TCACGCCCCC CCAAACCCCA
GCACCGGAAC CCCAAGGCCC AGCCTGGCGC GCGGCAACCA CCCCCCCACA CCCCACCAAC
CCCCGAACCA GAACCCGCAG GCCTAGCCGG CCTCCCCGCA GGCTTCACCC CCATAGGCGA
GGAAGCACGC CGCCTCGCCG AAGCAGCCGA CTCCACCGGC ACGCCCGAAA GCAGCTTCGG
TCAGCGGCCT GCGAGCGGCG GTTTCGGCCA GCAGTCAGCG ACTGGTGGTC AGCCCTCTTT
CGGCGGCTCC GGTCAGCAGC CCTCGGCTGG CAGTCAGTCT GCTTCCGGCA CGTTCGGTCA
GCAGCCCTCG GCTGGCAGTC AGTCTGCTTC CGGCACGTTC GGTCAGCAGC CCTCGGCTGG
CAGTCAGTCT GCTTTCGGCG CATTCGGTCA GCAGCCCTCG GCTGGCAGTC AGTCTGCTTT
CGGCGCATTC GGTCAGCAGC CCTCGGCTGG CAGTCAGTCT GCTTCCGGTG CGTTCGGTCA
GCAGCCCTCG ACCGGCAGCC AGCCTGCTTC CGGCAGCTTC GGCCAGCAGC CGGCCACCGG
CAGCCAGCCC GTTCCCGGCG GTTTCGGCCA GCCACCGGCG GCTGGTAG
 
Protein sequence
MDANRPAPGP GGYGGLGAGS IVSKNIQPLL ETDPRHLGPY SVRGRLGQGA MGSVYLGFAP 
TGQAFALKVL RQDFASDRDF RKRFTREIAA ARAVHSPFVN AVTDADPNAA TPWLASYFIP
GPPLSAAVQL AGPFSPRSVA HLGVGIGLAL QAIHTAGIVH RDLKPANVLV ASDGPRVIDF
GIARAEDASM LTATGMRLGT PSFMAPEQVA GIEVEAPADV WAVGGMLIYA ATGRTPFGNG
DAMAILYRVE NHAPDLQGLE PALAHIATRC LTKDPTARPT PAQLVDMCRA ALTTGLAGHP
ALRGSDVTGW LPSAISRDLA ARAVELANIG HPPPTPAPPP TTDPTTDPAG KPSGLGGFLR
RKAGGQAPQA TSTTGAPHTG QPNSRHSQGT AMGGGQDQYG QPNNQTGGGQ YGQQPYDPQP
YDPQPYGDQP YGDQQDPNNT ASDQPGQQQP PTQYGQQPGQ QPGQYGRQPG QYAQQPAPAW
GPSGPSGSDV PTIITPPQTP APEPQGPAWR AATTPPHPTN PRTRTRRPSR PPRRLHPHRR
GSTPPRRSSR LHRHARKQLR SAACERRFRP AVSDWWSALF RRLRSAALGW QSVCFRHVRS
AALGWQSVCF RHVRSAALGW QSVCFRRIRS AALGWQSVCF RRIRSAALGW QSVCFRCVRS
AALDRQPACF RQLRPAAGHR QPARSRRFRP ATGGW