| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4080 |
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| Symbol | |
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| ID | 3519849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4292838 |
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| End bp | 4293530 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286523 |
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| Product | pseudouridine synthase Rlu family protein |
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| Protein accession | YP_270735 |
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| Protein GI | 71279393 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAA CTATTGCAGA ACATCATGAT TTTATTGTTG TTGATAAAGA AGCAGGTGTA
AATTTTCATG ACGAAGGTGA CATAGGCTCA GGACTGTTTT CTCTGGTGAA AAAACAGTTA
CAAAGCCAAA ATAACAATAC TGAATTATAC CCAGTACATA GATTAGATAA GATGACCTCA
GGTTTAGTTG TTTTTGCCAA AACTTTAGCT TGCGCGCAGA TCTTTGGTCA ACTATTTAAC
GATCACGACA TAGAAAAGTA TTACTTGGCT ATTGGTGATA AAAAGCCAAT TAAAAAACAA
GGTTTAATTA AAGGTGACAT GGCGAAAAGC CGACGTGGTA TGTTCAAGTT ATTACGGTCG
ATGGAAAATC CTGCTGTTAC GCAGTTTTTT TCATTTAGCA TACCTAACAA ACAGCGCTTA
TACCTGCTTA AACCACATTC AGGTAAAACC CATCAATTGC GTGTTGCTTT AGCAAGTATT
GGTGCCCCTA TTGTTGGTGA TCCACTTTAT TACACAACAT CGCAGGCAGA CAGAGGTTAC
TTACATGCTT TTGTCCTAAG ATTTAACTAT TTAGGGGAAA GCTTCGAGTT TATTTCTCTA
CCTACTATGG GTGAACTCTA TTTAAATACT GAAGTGATTG AGCAATTATC GGCAATAAAA
AAACCTTGGC AGTTAAACTG GCCAAGGCTT TAA
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| Protein sequence | MYKTIAEHHD FIVVDKEAGV NFHDEGDIGS GLFSLVKKQL QSQNNNTELY PVHRLDKMTS
GLVVFAKTLA CAQIFGQLFN DHDIEKYYLA IGDKKPIKKQ GLIKGDMAKS RRGMFKLLRS
MENPAVTQFF SFSIPNKQRL YLLKPHSGKT HQLRVALASI GAPIVGDPLY YTTSQADRGY
LHAFVLRFNY LGESFEFISL PTMGELYLNT EVIEQLSAIK KPWQLNWPRL
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