Gene CPS_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3977 
Symbol 
ID3522732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4171460 
End bp4172431 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID637286423 
ProductLysR family transcriptional regulator 
Protein accessionYP_270635 
Protein GI71282259 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTGA CATTATCCAT AACTTTTACT AAACTAAAAC ACACTAATAG TACGAACACT 
TTCAAATATA AGTTAATAAT GAATACTTCA GATCTAAATC TATTCATACG AATTGTCGAA
ACAGGCAGCA TAACGGAAAC CGCAAACCAA GTTAATCTAA CGCCTGCGGC AGTCAGTTCA
GCTCTCAAAA GATTAGAAAA ACAGTTAGAT GTACAGTTAC TTATTAGAAC GACAAGACAA
TTGAGGATTA CGCCACAAGG AGAGCAATTT CTGTTTCATT GCCGCAATGC GTTAGCTAGT
TTAGAGCAAG GGCGTATATC GGCACATCAG ACACAAGGTA AGGTGAGTGG GAAGCTGAGG
TTATCCGTTT CGTCTGACTT AGGTCGTAAT ACCCTTTTAC CTTGGATAGA AGAGTTGCTT
GAAGAGCATC CTTTATTGTC GATTGACTTG ACTGTAGGTG ATTCAGTTTC AGACTTTTAC
TTAGATCAAG TTGACATGGC CCTTCGTTTT GGGAAGCCAG AGGACTCATC CATGGTTTCA
TTTCAGATTG CAACTATGAG TAGAATCACT TGCGCATCTC CTGCTTATAT ATCGAAGTAT
GGAAATCCAG AAACCCCAGA AGATCTGCGT AATCATAATT GTTTATTACA CCGTAGAGCT
GGTCGTTTAT TTGATCATTG GGAGTACACT GATAGTTTAG GTACATACAA AATCAAAGTT
AATAGCAATA GAATAAGTAA TGACACAGAT ATAGTGAGAC GTTGGGCTGT TAGTGGTAAA
GGTATTGTCT ACCGCTCCCT GATTGATGTT TATTCAGATT TAAATAGCGG ACAGCTTGTA
CAGCTCTTAT CGGGTTATGA TTCGTCTTCT GTTGAACTGC ATTTGATTTG TCCAAACAGA
GAGCAGGTCA GCCCCGCAGT GATTGCATTT AGGGAGCTTC TTAGGAGCAA AATTTCAAAA
GTTCTCTCTT GA
 
Protein sequence
MIVTLSITFT KLKHTNSTNT FKYKLIMNTS DLNLFIRIVE TGSITETANQ VNLTPAAVSS 
ALKRLEKQLD VQLLIRTTRQ LRITPQGEQF LFHCRNALAS LEQGRISAHQ TQGKVSGKLR
LSVSSDLGRN TLLPWIEELL EEHPLLSIDL TVGDSVSDFY LDQVDMALRF GKPEDSSMVS
FQIATMSRIT CASPAYISKY GNPETPEDLR NHNCLLHRRA GRLFDHWEYT DSLGTYKIKV
NSNRISNDTD IVRRWAVSGK GIVYRSLIDV YSDLNSGQLV QLLSGYDSSS VELHLICPNR
EQVSPAVIAF RELLRSKISK VLS