| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3684 |
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| Symbol | |
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| ID | 3520575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3828936 |
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| End bp | 3830624 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286132 |
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| Product | hypothetical protein |
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| Protein accession | YP_270352 |
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| Protein GI | 71280112 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAG CCAGTTTAAT CTGTAATAAA AAAAATAATA TAGATTTAGT CTTAGAGCCA
ATCAAAGGTG GTGACACTAT ATCCACCTTG AGTATCAAAG AATTAATTGA TGCATCAGAA
TTTGCAAAAC TTCGCATTAA TAACGGTAAT ATTAAAAATG CTGTTGCTGA GTTAAATGAT
GTTTTAAAAC CCCTACAAGA TAAAAAAGTA GGCAGAACAA TTCGCTATCA AGTACTCGAA
CGGGTTGATG CGAAAATTAG TATCACTATA GAATCCGATG AGATGGGGGC TACCGCTGAA
ATTACTAGCG CTCAAGGTGG TAAACATCTT TCTGCAAAAG CGATATTAAA CGCCGCACAA
GAGGCAGGTG TAAAAAAAGG CTTTAGTAAA GAGCATTTAA TTCAACTTGC ACAACTTGCT
GCAAAACAAA TTCCCAATAG CCAGATTGAT ATGCAAATTG CTACCGGGAA AATCGCAGTT
AATGGCAAAG ATGCCCTAAT ACAGCCTTTA GTTGAAAGTG CCCAAGCCAG AATTTTAAAG
CCTAAAAAAC GAGAAGATGG TAGTGTCGAC ATGCGAGACT TAGGCGATAT TATCTGTGTA
AATATAGGTG ATGCTATTGC AAAAAAAGTG CCTTTAACCC AAGGGAAGCA AGGCTATACT
GTTACTGCTA CCCCTCTATC ACCAGAGCCT GGTAATGATG TTGAACTCGT CGCGGGAGAA
GGAACAAACA TAAGTCCTCA AAATACTAAT ATTCTGGTTT CTGAAAAAGT TGGCTTACCT
AAACTTATTA ATAATGGTAT GGAAGTTGAT GAGATTTATA AAATTAAAAA TGTCACTGTT
GCCACCGGTA ATATCAACTT TACCGGTAGT GTTATTATTG ATGGTGATGT TACTGAAGGT
ATGAAAGTAA CTGCTTCAGG TGATATTACG GTAGGTGGTT TTGTTGAGTC AGCAACCCTT
GAAGCCGGTG GTGACATCAC TATATCTGGT GGGATTATTG GCCGAAAACA TGATGTTGAA
AAAAAACATA TTACCAATAT CACCATGAGT GTCAATATCA GTGCAAAAGG CAGTATCTAT
GCAAAGTATG GGCAATATGC CCAAATTACT TGTTACCAAG ATGTTCGTAT TGAAAATCAA
TTACTGCACA GCATTTTAGA TATAAGTGGC CGATTATGGA TAGGAAAAAA TGAGCAAGCT
AACGGAAAAC TAATTGGTGG CTACACCAAA GCAGGGACAT CGGTTCATGC AGGTATTATT
GGCGCAACAG CGGGTAGTAA TACCATTATT AATTTTGAGC ATAAAATACT CAAGTTTAAA
GATGAAATTC ACCAATTAGA AGAGCGACTT AAAATAGAGT CTGATAAAAC AAACGAATTG
AAAGTAGCAA TCAATAAATT AAAAAAATTA CCAAAAGAAA AAGCCAGGCC AGAATTAGTA
GCTAAAATTG TACCAACCTA TCAATATCAT GCTAATCAAA TGGGTGAAAT ACTTAACGAA
AAGCTAATCC TCGAAGACAG TTTTCAAGGA TATATAGTCA GTATTTATGT TGAAGCAACG
GAGAAGCTTT ATCATGGCGT AGAGTTAATT GTTGGCGACT ATAATGACAG ATCTCGTCGT
GAATATGGTC CAAGCAAAAT GAGATATCGA GAGCGAAAAA TACTGATTGA TCCAATAGTG
AATACATAA
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| Protein sequence | MTKASLICNK KNNIDLVLEP IKGGDTISTL SIKELIDASE FAKLRINNGN IKNAVAELND
VLKPLQDKKV GRTIRYQVLE RVDAKISITI ESDEMGATAE ITSAQGGKHL SAKAILNAAQ
EAGVKKGFSK EHLIQLAQLA AKQIPNSQID MQIATGKIAV NGKDALIQPL VESAQARILK
PKKREDGSVD MRDLGDIICV NIGDAIAKKV PLTQGKQGYT VTATPLSPEP GNDVELVAGE
GTNISPQNTN ILVSEKVGLP KLINNGMEVD EIYKIKNVTV ATGNINFTGS VIIDGDVTEG
MKVTASGDIT VGGFVESATL EAGGDITISG GIIGRKHDVE KKHITNITMS VNISAKGSIY
AKYGQYAQIT CYQDVRIENQ LLHSILDISG RLWIGKNEQA NGKLIGGYTK AGTSVHAGII
GATAGSNTII NFEHKILKFK DEIHQLEERL KIESDKTNEL KVAINKLKKL PKEKARPELV
AKIVPTYQYH ANQMGEILNE KLILEDSFQG YIVSIYVEAT EKLYHGVELI VGDYNDRSRR
EYGPSKMRYR ERKILIDPIV NT
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