| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1755 |
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| Symbol | iscS |
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| ID | 4204924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1953558 |
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| End bp | 1954754 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566305 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_699070 |
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| Protein GI | 110802884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00778501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAATA GAGTTGTTTA TATGGACTAC TCAGCAACTA CATATGTTAA GCCAGAAGTA
TTAGAGGAAA TGTTACCATA TTTCACAAAT AAGTTTGGAA ATCCATCAGC ATTTTACGGA
GTTTCAAGAG AATCAAGAAT GGCTGTAGAT ACTGCTAGAG AAAGAGTAGC TAAAGTATTA
AATGCTGATA CAAATGAAAT CTACTTTACT GGTGGTGGAT CAGAAGCAGA TAACTGGGCA
ATAAAAGGAA TAGCTTTTGC TCATAAAAAT AAAGGAAATC ATATAATAAC TACAAAAATA
GAACACCATG CTGTATTACA TACTTGCCAA TGGTTAGAAA AACAAGGCTT TGAAGTAACT
TACTTAGATG TAAATGAAGA AGGTTTTGTT GATTTAGAAG AATTAAAAAA TGCTATTACT
GATAAAACTA TCTTAGTTTC TGTAATGTTT GCAAACAATG AAATAGGAAC TATAGAGCCA
GTTAAGGAAA TAGGAAAAAT TTGTAGAGAA AGAAAAGTAA TATTCCATAC AGATGCAGTT
CAAGCTGTAG GAAATGTAAA GATAGATGTT AAAGATATGA ACATCGATTT ACTTTCATTA
GCTGGACATA AAGTTTATGG ACCAAAAGGA ATCGGAGCTT TATATATAAG AAAAGGTATA
AGAATAGATA ACTTAATCCA CGGTGGTGGT CAAGAGAGAG CTAGAAGAGC TGGAACTGAG
AACATACCTG CAATAGTTGG ATTAGGAAAG GCTATGGAAA TAGCTGGAGA GAACTTAGAT
GAGCATATAG CTAAAATTTC TAAGTTAAGA GATAAGTTAA TAAAAGGATT ATTAGAAGTA
CCATTTACAA GATTAAACGG ACCAAAAGAT GGTAGCAAGA GATTACCAGG TAACGTAAAT
GTATGCTTTG AATTTATTGA AGGTGAAGGA ATTCTTCTTT CATTAGACTT TGAAGGAATT
TGTGGTTCAA GTGGAAGTGC TTGTACATCA GGATCATTAG ATCCATCACA CGTGTTATTA
GCAATAGGTT TACCTCATGA AATAGCACAT GGATCATTAA GATTAAGTTT AGGTGAAGGT
ACAACTGAAG AAGATGTTGA TTACGTATTA GAAAAAGTAC CACCAATAAT CGCAAGATTA
AGAAGTATGT CACCATTATG GAAAAATCAT TTAAGAGAAG TAGAAGGAGA GAATTAA
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| Protein sequence | MNNRVVYMDY SATTYVKPEV LEEMLPYFTN KFGNPSAFYG VSRESRMAVD TARERVAKVL
NADTNEIYFT GGGSEADNWA IKGIAFAHKN KGNHIITTKI EHHAVLHTCQ WLEKQGFEVT
YLDVNEEGFV DLEELKNAIT DKTILVSVMF ANNEIGTIEP VKEIGKICRE RKVIFHTDAV
QAVGNVKIDV KDMNIDLLSL AGHKVYGPKG IGALYIRKGI RIDNLIHGGG QERARRAGTE
NIPAIVGLGK AMEIAGENLD EHIAKISKLR DKLIKGLLEV PFTRLNGPKD GSKRLPGNVN
VCFEFIEGEG ILLSLDFEGI CGSSGSACTS GSLDPSHVLL AIGLPHEIAH GSLRLSLGEG
TTEEDVDYVL EKVPPIIARL RSMSPLWKNH LREVEGEN
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