Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1577 |
Symbol | msrB |
ID | 4205120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1767755 |
End bp | 1768198 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566128 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_698893 |
Protein GI | 110803097 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000632227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATATA AAAAGAAGGA AAAAGAGGAA TTAAAAAAAA TCTTAACTGA GGAAGAATAT TATGTTACTC AAGAAAATGG AACTGAAAGA CCTTTTACAA ATGAATATTG GGACTTTAAT GGAGAAGGAA TATATGTAGA TATAACTACT GGAGAGCCTT TATTTACTTC AAAGGATAAA TTTCACTCTT CTTGTGGATG GCCTGCCTTT TCAAAACCAA TAGATAGGAG CATAATAAAA GAAAAGGTAG ATAAAAGTCA TGGAATGGTT AGAACGGAAG TTAGAAGTAA ACTAGGAGAT TCACATTTAG GCCATGTGTT TTGTGATGGA CCAGAGGAAT TAGGTGGATT AAGATATTGC ATAAATTCTG CTTCTTTAAA ATTTATTCCG AAGGAAGAAC TAAAGGAAAA GGGATATGAA GAATATTTAG AGCTCTTTAA ATAG
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Protein sequence | MKYKKKEKEE LKKILTEEEY YVTQENGTER PFTNEYWDFN GEGIYVDITT GEPLFTSKDK FHSSCGWPAF SKPIDRSIIK EKVDKSHGMV RTEVRSKLGD SHLGHVFCDG PEELGGLRYC INSASLKFIP KEELKEKGYE EYLELFK
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