| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1361 |
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| Symbol | |
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| ID | 4205863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1532801 |
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| End bp | 1533427 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565915 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_698681 |
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| Protein GI | 110802731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00515151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC GTACAAAAAC GCCAAACTAC ATAAAAATAG CTATTGATAT AGCTAATAGA
GTTTTAAATA ATGATTTTAA AGAAGGAAGT AAAATTACAG GTCGTACAAC CCTAGTTAGC
ATATATAAAG TTTCACCTGA AACCATAAGA CGCTCAGTGG CCTTACTTAA GGATATGAAT
GTAGTATCTG TTAATGAAAA AAGTGGAATA ATCATAAATA GTAAAGAAAA TGCCAAGGAC
TTTTTAATTA AATTTAAAGC TCAATCCGAC TTTACAACCT TAAGCAATGA TACTTATAAA
ATATTAAAAG CTAAAAATGA ATTAGATAAA CAACTTGAAA AAAACATAGA AAATATAATT
GAATTTGCTA CACAACTTAG AAATGTAGGA ACTGTTATAC CCTTTGAAAG CATTGTTGAA
AGTGAAAGCT TTGCTGTTGG AAAAAGCATT GGAGATCTAA ACTTTTGGCA AAATACAAAG
GCAACTATAA TAGGAGTTAA ACGAAAAGGA GAAATGTTCC TTTCTCCAGG ACCTTATTTC
AAAATAATGG CTGATGATAT AATAATGTAT GTTGGTGAAG ATGAGGTTTT AAAAAATGTA
AAAAACTATA TATCAAACAA TGAATAA
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| Protein sequence | MAKRTKTPNY IKIAIDIANR VLNNDFKEGS KITGRTTLVS IYKVSPETIR RSVALLKDMN
VVSVNEKSGI IINSKENAKD FLIKFKAQSD FTTLSNDTYK ILKAKNELDK QLEKNIENII
EFATQLRNVG TVIPFESIVE SESFAVGKSI GDLNFWQNTK ATIIGVKRKG EMFLSPGPYF
KIMADDIIMY VGEDEVLKNV KNYISNNE
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