Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1356 |
Symbol | |
ID | 4205066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1529251 |
End bp | 1529736 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565910 |
Product | ybaK/ebsC protein |
Protein accession | YP_698676 |
Protein GI | 110801708 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00173308 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG ATAAGAAGCT TAAGACAAAT GCTATGAGAA TATTAGATTC TAAAAAGGTT TCATATGAAA TGTTAAGTTA TGAAAGTGAA GATGGAAAGA TAGATGGAAT TTCTGTAGCT CATAAAATTG GAGTAGATGA GAAAAATGTA TTTAAAACAT TGGTAGCTCA AGGAACAAGC AAAGAGCTTT ATGTTTTTGT TATACCAGTT GCAGAAGAAT TAGATTTAAA AAATGCTGCT AAGATAGCTG GAGAAAAGAA AGTTGAAATG ATAGCAGTTA AGGATATAAT GAAATATACT GGATATATTC GTGGTGGATG TTCCCCTATA GGAATGAAAA AGAATTATAA AACCTTTATA CATGAGAGCG CAGAAGATTT AGATTTTATA ATATTTAGTG CAGGGAAGAT AGGACATCAA ATAAAAATGA ATCCAAAAGA CTTAGTAAGT GTTGTAGAAG GGGAATTTGC ATTTTTAATA AAATAG
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Protein sequence | MAKDKKLKTN AMRILDSKKV SYEMLSYESE DGKIDGISVA HKIGVDEKNV FKTLVAQGTS KELYVFVIPV AEELDLKNAA KIAGEKKVEM IAVKDIMKYT GYIRGGCSPI GMKKNYKTFI HESAEDLDFI IFSAGKIGHQ IKMNPKDLVS VVEGEFAFLI K
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