| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1258 |
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| Symbol | |
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| ID | 4204710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1412229 |
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| End bp | 1414784 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565814 |
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| Product | hypothetical protein |
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| Protein accession | YP_698580 |
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| Protein GI | 110802924 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0075337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTAA ATATAAAGAT AAGTGATAAA TTAAAATTAT TTTTTAAAAT AGCATTCGTT
TCCTTAGTAA TACTGTTTAT AGTTAGGGAA TTTACTTCAG TATTTAAAAA TTTCAATTCA
GAATATTTCT TTATGTATAG AAATAAACTA GACTTTTTAA ACCTATTAAT AATTGCAGCA
TTAGGTGTAA TTTCTTACAT TCCTTTATCT TTCTACGATT TCATTTTAAA GAGAAAAGTT
AGAATAAGAT TAAAAAATAG AAAGTTATAT AAGTATTCTT GGATAGCAAG TTCTATTGCA
AGTTTGCTTG GATTTGGAGG AGCTACATCC TTAGCTTTTA AACAGTATTT TTATGGTGAT
TATGTAGATG ATAAAAAGAA ACTATTAAAA GAAATTGGTA AAATAGTAGC CTTAAACTTA
ACAGGCTTAT CAATAGTTTG TTGTACATAT ATGGGTATTA GAATATCTTC ATGGAATAAT
CTAGGTATAA TAAAATATGC CATAGGAATA ATAGCCTTAT ATGCACCAGG ATTTATACTT
TACTCAGCTT ATAAATATAG CAAAACAAAG GATAAGTTAG AGTTTTTCAG CACCTTAGGT
ATTATATTCA TATCATTTTT AGAGTGGCTT ACAACAATAA TTTTAATTTA TGAAACTTTA
AGAATAACAG GAGCATCAAT AAGTGTTTTA AATTTCTTGC CAATATATAT TGAATCAGCA
GTTGTTGGAA TGATTAGTAT GATTCCAGGG GGAATTGGTA CCTTTGATTT AACCTTTATG
ACTGGATTAG AGGCCTTAGG TATTCCTATA GAACAAACCC TATTAGTTAT AATACTTTAT
AGAATAAGTT ATTACATAGT TCCAGCGCTT ATAGGTGTAT TACTTTTTGT ACATGATTTT
GGTGGAAAAA TAAATAAAAA GTTTAATGGA TTACCTTATG AAATAGTTTC TAAGGTGGCT
TATAAGATAG TGGTTTCTTT AGTATTTATA TCAGGAGCTA TTATAGTTTT ATCAAATATA
GCACCTCAAT ATTTATTAAA GATAAAATTA TTAAAAGAAA TTTTAGGTAA ACAAGTATTA
GGATTATCAA TTGGAATGAG CGTAGTACTA GGATTTTTAA TAATGCTTGC AGCTCTTATG
CTAAAATATA GGGCTAAAAG TATTTACAAA GCAAGTATGG TTTTATTTAT ATTAGGAATA
ATATTGTCCT TAACAAAGGG AATTAATCCT TATGAATTAG TATTTTTAAT TATTGTAGCT
TACCTTCTAT ATTTAAGTAA GAGAATGTTC TACAGGGATA GCTTTGTTGT AAGTTGTAAA
AATACCTTAA TAGATTCAGG GATATTAATT GCATCTTTTT CAATTTATTT CTTTATTTTA
ATTACCTTTG GAACACATCT TAAATATGTA GGAATAGTTC GTAAAATGCC TTATAAAATG
GCATATAAAT TTGGATTTAT AGCTTTTGCT TTAGTAACTG TAATATATGT AGCTATTTAC
TTTTTAAATA TAAGAAGAAA AATTCCTGTT AAGACCTTTG ATCAGTGTAG CGAATATATA
GAAAAGATAA TAGAAGAATA CAAGGGTGAT TCCCTAACTC ATTTAGTATT TTTAAAGGAT
AAGTATATTT ATTTAAATGA AGATAAGGAT CTTTTCATTC AATATGAAGT CTATGGAGAT
AAGCTTTTTG TTTTAGGAAA TCCTGTGGGC AATAATGAAA ATCTATTTAG GGAAATAGAA
AAGTTTTGTG AGTATGCTGA TAACTATGGT TACACACCAG TTTTTTATCA GGTTAATGAA
GAAATGATAA GTTACCTTCA TTCTAATGGA TATGATTTTA TGAAAATTGG AGAAGAAGCT
AAGGTTGATG TAAAAGAATT TAAAGTTGTA GGAAATAAAA TGAAGAGTTT AAAAACTTCA
AGAAGTAAGG TGACTAAGGA AGGTTATACT TTCCACATGG TTGAACCACC TTTTTCAAGG
GAATTTTTAG ATTACTTAAA AGAAATATCA GATGAATGGT TAGATGGAAG AAAAGAAAAA
GGATTTTCAG TGGGATTCTT TGATGAAGAT TATTTAAATA AAGCTCCTAT AGCTATTTTA
AGAGATAGAG AGGGAGAAAT AAAAGCCTTT GCTAATATAA TGTATATGTA TGATGATGAA
AGCTTCTCAG TGGATTTAAT GAGATTTAGT AAAAATACTC CAAGGGGAGT TATGGATTTT
ATGTTCATAA ATTTAATTGA GTATGGAAAA GAAAAGGGAT ATGAAATATT CAACATGGGA
ATGGCTCCTT TAGCCAATGT TGGTTTATCT AAGTATGCTT TCTGGAATGA AAAATTAGCC
CTTCAATTCT ATGAGAATGG ACAAGCACTT TACTCCTTTA AAGGATTAAG ACGTTTTAAA
GAGAAGTTTA GTCATAATTG GGAGTATAAA TATATTGCTT ACAGAAGAAA TACATCCATA
CTAATAACAG TAATACAAGC AGCTATAGTT TGCTCAAGAA ATAGAAATGT AGATGAAAGT
ATAGTTGTAA GAAACTTAAA AAGTTTAATT AAATAA
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| Protein sequence | MKLNIKISDK LKLFFKIAFV SLVILFIVRE FTSVFKNFNS EYFFMYRNKL DFLNLLIIAA
LGVISYIPLS FYDFILKRKV RIRLKNRKLY KYSWIASSIA SLLGFGGATS LAFKQYFYGD
YVDDKKKLLK EIGKIVALNL TGLSIVCCTY MGIRISSWNN LGIIKYAIGI IALYAPGFIL
YSAYKYSKTK DKLEFFSTLG IIFISFLEWL TTIILIYETL RITGASISVL NFLPIYIESA
VVGMISMIPG GIGTFDLTFM TGLEALGIPI EQTLLVIILY RISYYIVPAL IGVLLFVHDF
GGKINKKFNG LPYEIVSKVA YKIVVSLVFI SGAIIVLSNI APQYLLKIKL LKEILGKQVL
GLSIGMSVVL GFLIMLAALM LKYRAKSIYK ASMVLFILGI ILSLTKGINP YELVFLIIVA
YLLYLSKRMF YRDSFVVSCK NTLIDSGILI ASFSIYFFIL ITFGTHLKYV GIVRKMPYKM
AYKFGFIAFA LVTVIYVAIY FLNIRRKIPV KTFDQCSEYI EKIIEEYKGD SLTHLVFLKD
KYIYLNEDKD LFIQYEVYGD KLFVLGNPVG NNENLFREIE KFCEYADNYG YTPVFYQVNE
EMISYLHSNG YDFMKIGEEA KVDVKEFKVV GNKMKSLKTS RSKVTKEGYT FHMVEPPFSR
EFLDYLKEIS DEWLDGRKEK GFSVGFFDED YLNKAPIAIL RDREGEIKAF ANIMYMYDDE
SFSVDLMRFS KNTPRGVMDF MFINLIEYGK EKGYEIFNMG MAPLANVGLS KYAFWNEKLA
LQFYENGQAL YSFKGLRRFK EKFSHNWEYK YIAYRRNTSI LITVIQAAIV CSRNRNVDES
IVVRNLKSLI K
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