Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1158 |
Symbol | |
ID | 4204061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1304379 |
End bp | 1304888 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 17% |
IMG OID | 642565714 |
Product | hypothetical protein |
Protein accession | YP_698480 |
Protein GI | 110801644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00594383 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA ACGCTATTAA CTTATTTAAC TTTGTACTTT TTATATCTTT TTTATGTATT TTTATAAAGA ATTGGTTTAT TTATAAGAGA TTATTTTCTA ATGAATCCTA TTATATTAAT CCAAGCGCAA AAAAGGATAT ACAAAAGCTT ACATCATTTA AATTTTTATC TGCAATTATA CAGTTAACAG TAGTTGCAAT TTTACAATTA ATATTATTCT TTTATACAAA CAAAATTAAT TTTTTTAATA TAGCAGCTTT ATATTTTTTA ATATATGCTT TTAATTTATC TATATCTATA AATAACGATT ATATTTATAG AAATTTTAAA TTAATAAAAA AGTCTGATAT AGATTATTTT AATTTAGATT ACAAAAATAA TATTGTAAAT ATATACTTAA AAGACAAAAA GAAACCAATT ATAATAGCAT TTAAAAAAGA TTTATCTAAT TTTGCAAAAC TTTTAAATGA ATTAGGGTAT AGAGAACTTT TGACTAGAAA AAATTTTTAA
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Protein sequence | MKTNAINLFN FVLFISFLCI FIKNWFIYKR LFSNESYYIN PSAKKDIQKL TSFKFLSAII QLTVVAILQL ILFFYTNKIN FFNIAALYFL IYAFNLSISI NNDYIYRNFK LIKKSDIDYF NLDYKNNIVN IYLKDKKKPI IIAFKKDLSN FAKLLNELGY RELLTRKNF
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