Gene CPR_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0994 
Symbol 
ID4205213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1135044 
End bp1135688 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content27% 
IMG OID642565551 
ProductDedA family protein 
Protein accessionYP_698317 
Protein GI110801620 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00874601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGA TAAGTAATTT TTTTGATCTA ATATTACATT TAGATAAATA TCTAGGTGTT 
TTTATCAATA ATTATGGAAC TTTGACTTAC TTAGTTTTAT TTTTAATAAT CCTTGCGGAA 
ACAGGATTAG TAGTAACTCC TTTTCTTCCT GGAGATTCAG TAATATTTGC ATCAGCTACT 
TTCTGCGCTT TAGGTATGAT TAATATTTAC ATATTAGTAC CATTATTATT AATTGCAGCC 
ATACTTGGAG ATACTTTAAA CTATAGTATT GGTAAATTTT TAGGTAGCAA ATTACTTGCT 
AATTCTAAGC TTATAAAAAA AGAGTATATT GAGAAAACTA ATACTTATTA TGATAAATAT 
GGTGGAAAAA CCTTAATAAT AGCTAGATTT ATTCCTATAA TCCGTACCTT TGCACCCTTT 
GTTGCAGGTA TAGGAACAAT GAAGTATAAA AACTTTTTAA CTTACAATGC AGTTGGTGGA 
TTTATTTGGG TTATACTTGT ATCAAGTTTA GGATATTTCT TTGGGAATAT AAAAATTGTT 
GCTGAAAATT TCTCAATAGT TATTATAGGT ATAATAGTTG TTTCTATCTT ACCTGCTATA 
GTAGGAATAC TTAAAGCTAA ATTCTCACCT AAAGCTGCTA TGTAA
 
Protein sequence
MNLISNFFDL ILHLDKYLGV FINNYGTLTY LVLFLIILAE TGLVVTPFLP GDSVIFASAT 
FCALGMINIY ILVPLLLIAA ILGDTLNYSI GKFLGSKLLA NSKLIKKEYI EKTNTYYDKY 
GGKTLIIARF IPIIRTFAPF VAGIGTMKYK NFLTYNAVGG FIWVILVSSL GYFFGNIKIV 
AENFSIVIIG IIVVSILPAI VGILKAKFSP KAAM