Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0975 |
Symbol | |
ID | 4206474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1111015 |
End bp | 1111503 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642565532 |
Product | acetyltransferase |
Protein accession | YP_698298 |
Protein GI | 110802227 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000033861 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATTG AAATTTATGA AATTGAAAGC TTTAAAGATT TGAATCTATT TTGGAATATG TTCCATGATT ATATAAACTA TATTTTTGAA ATGAGTCCAC TCTCTAAAGA AACATTTGAA TATTTTTTAT CAAAAGAATA TAAAGATTCT GTTTTAGAAC TTTCTGAAAG AGATTTTAAC CCACTAAAAA TAATATTTTT TAAGAAGAAA GACAAAATAC TAGGTTTTGC AACTTACATT ATATACATTG ATGAAAGTGG AAAATCTATA ATATTAGAGT ATTGTTTAAA CAAAGATTTT AGAAATAAAG GCTTAGGTAA AATTGCATAT AATAAACTTC AAGAAAAAAT GATAAAAGAA GGTGCTAAAA CTATAGAACT TAACCCTACC AACAAAAGAA ATGAACTTTT TTGGAAAAAC AATGGCTTTT CTGATACTAG AATCTTTTTG CAAGATGGAA GAAACTTATT GATAAAAAAA CTAAGGTAA
|
Protein sequence | MSIEIYEIES FKDLNLFWNM FHDYINYIFE MSPLSKETFE YFLSKEYKDS VLELSERDFN PLKIIFFKKK DKILGFATYI IYIDESGKSI ILEYCLNKDF RNKGLGKIAY NKLQEKMIKE GAKTIELNPT NKRNELFWKN NGFSDTRIFL QDGRNLLIKK LR
|
| |