| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0938 |
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| Symbol | |
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| ID | 4206533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1071634 |
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| End bp | 1073724 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565496 |
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| Product | periplasmic [Fe] hydrogenase 1 |
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| Protein accession | YP_698262 |
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| Protein GI | 110801841 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1592] Rubrerythrin
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0625857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC ACTTAGCTAC AACTATACGT GTAGCTATTG AGAAGGATAA TCCATCTATT
TGTAGAGACG AAGAGAAGTG TATAAAATGT GGTTCATGTA AAAATATATG TACAGATTAT
ATAGGTGTAA ATGGTCATTA TTCTTTAGAA AAAACTAATG ATATTGCTGT TTGTATAAAT
TGTGGTCAAT GTGCAAATGT ATGCCCTACA TCTAGTATTA CCGAAGTTTT TGATTATAAA
AAGGTAGAAG ATGCAATAAA TGATAAAGAT AAAATTGTAA TAGTTTCCAC ATCTCCAGCA
GTTAGAGTAT CTTTAGGTGA AGAGTTTAAT ATGGACGATG GAAGTTTTGT TCAAGGTAAA
ATGATAGCAT TGCTTCGTAA GTTAGGTTTT AAATATGTTC TTGATACTAA TTTTGCAGCT
GATATGACTA TAGTAGAGGA AGCTAGTGAA TTGGTAGAAC GTATAACTAA AAATAATAAA
CCGTTACCTC AATTTACTAG TTGTTGTCCT GCTTGGATAA AATATGCTGA AACTTTCCAC
CCAGAGATAT TAGATCATAT TTCAACTTCA AAGAGTCCTA TAGGAATGCA AGGTCCTACT
ATAAAAACCT ATTTTGCAAA GAACATGGGA ATTGACCCTT CTAAGATTAT AAATGTAGCT
TTAACTCCAT GTACAGCTAA AAAATTTGAA ATAAAAAGAG AAGAAATGAA TGCATCAGGT
AGATATTATG GCATAGAAGA TATGCGTGAT ATGGATTATG TTATAACAAC TAGAGAAGTG
GCTATTTGGG CTAAAGAAAA AGGAATTGAT TTTAATTCTT TAGAGGATAG TAACTTTGAT
AAATTAATGG GAGAAGCATC AGGGGCTGGT GTTATCTTTG CTAATACAGG TGGAGTTATG
GAAGCTGCTT TAAGAACTGC ATATAAGTAT ATAACTAAAA AAGAACCACC TAAAGATTTT
TATGATTTAG AAGCAGTAAG AGGTATGGAA GATATACGTG AAGCTAGTTT TAAAATAAAT
GACTTAGATA TAAATGTAGC TGTTATATAT GGGACTGAAA ATGCTTCAAA ATTTATTTCA
AAAATGAAAG ATTCTGATAA AAAATATCAT TTTGTTGAAG TGATGACTTG TCCAGGGGGA
TGCATTGGTG GAGGTGGACA ACCTAAGGAT AAGAATTTAC AAGGTGATAA GCTTAGAGAA
AAGCGTATAG ATGGTTTATA TAGAAGAGAT TCTAGTATGA AATTAAAAGT CAGTTGTGAA
AATGAAGAGA TTAAAAATTT ATATAAAGAG TTTTATGGAA AACCTTTAAG CGATCTTGCT
GAGAAAATGT TACATACAAC TTATTCAGAT AGAAGTAGTG ATTTAGGAGG AGAAAATATG
AGTGAATCAG TAAAATATCG TTGTACAGTT TGTGGATACA TACAAGAAGG AGAATTACCA
GAGGGATTTA TATGTCCAGT CTGTAAGAGT CCAGCATCAG TATTTGTAAA AGTTGAAGAA
AAAACAGAGG TAGATGATAA AGAGGATAAT AAATCAAAAT CAACTAATGA AAGTAGTAAT
AAATATAAAG GAACAAAAAC TGAAAAAAAT TTAATGGATG CATTAGCTGG AGAATCAATA
GCTAGGAATA AATATACATT CTTTGCGGAT GTAGCTAAAA ATGAAGGATA TGAACAAATA
TATAAACTAT TTTTAAAAAC AGCAGGAAAT GAAAGAGAGC ATGCTAAATT ATGGTTTAAA
GAATTAGGAT ATTTAGGGGA TACTCAAGAG AATTTATTGC ACGGATCAGA AGGAGAGCAT
TATGAATGGT CAGATATGTA TGCTAGATTT GCAAAAGAGG CTGAAGAAGA GGGATTTTTT
GATTTAGCAG AAAAATTTGT GGAGGTTGCT AAAATAGAAA AATCTCATGA AGATAGATAT
AGAAAGCTTT TAAACAATAT AAAGATGAAA AAGGTATTTG AAAAATCAGA AGAAACTATG
TGGGAGTGCT TAAATTGTGG ATATCTTGTT ATGGGTAAAA AAGCTCCAGA GGTTTGTCCA
GTATGTAATT ATGCTGAAGG ATTTTTTGAA GTAAGAGCAG AAAATTATTA A
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| Protein sequence | MSKHLATTIR VAIEKDNPSI CRDEEKCIKC GSCKNICTDY IGVNGHYSLE KTNDIAVCIN
CGQCANVCPT SSITEVFDYK KVEDAINDKD KIVIVSTSPA VRVSLGEEFN MDDGSFVQGK
MIALLRKLGF KYVLDTNFAA DMTIVEEASE LVERITKNNK PLPQFTSCCP AWIKYAETFH
PEILDHISTS KSPIGMQGPT IKTYFAKNMG IDPSKIINVA LTPCTAKKFE IKREEMNASG
RYYGIEDMRD MDYVITTREV AIWAKEKGID FNSLEDSNFD KLMGEASGAG VIFANTGGVM
EAALRTAYKY ITKKEPPKDF YDLEAVRGME DIREASFKIN DLDINVAVIY GTENASKFIS
KMKDSDKKYH FVEVMTCPGG CIGGGGQPKD KNLQGDKLRE KRIDGLYRRD SSMKLKVSCE
NEEIKNLYKE FYGKPLSDLA EKMLHTTYSD RSSDLGGENM SESVKYRCTV CGYIQEGELP
EGFICPVCKS PASVFVKVEE KTEVDDKEDN KSKSTNESSN KYKGTKTEKN LMDALAGESI
ARNKYTFFAD VAKNEGYEQI YKLFLKTAGN EREHAKLWFK ELGYLGDTQE NLLHGSEGEH
YEWSDMYARF AKEAEEEGFF DLAEKFVEVA KIEKSHEDRY RKLLNNIKMK KVFEKSEETM
WECLNCGYLV MGKKAPEVCP VCNYAEGFFE VRAENY
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