Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0754 |
Symbol | |
ID | 4204921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 885227 |
End bp | 885937 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565314 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_698080 |
Protein GI | 110802881 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000212493 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA CATGTACATG TGGATCATGT AAAGAACTTT GTGCTAAAAA TATATCTATT TTTTCAACAT TATCTAATGA AGAGTTGTTA AAAATAGTTA ATATGACTGA ACATAAAAGT TTTAAAGAAA ATGATGTTTT ATGTAGAGAA GGGGAAAAAT CAGATAAGCT TTTCTTAATT AGAGAAGGCA GGGTAAAGAT ATGCAAAATA ACTAAAGAGG GAAAAGAACA GATAGTTTAC GTATTATCTA AAGGTGATTT CTTTGGAGAA AATAATCTTT TTACTAGTAA TAATATTAGC AACTTTTCAG CTTATGCAAT AACAGATGCA AAGTTATGTA TTTTAAAAAA GGAGAATTTA GAAAAAATAC TCATAAAAAA TCCAGAGATA TCATTAAAAA TAATACAAGA GATGGCAGAT AGAATAAATT CTGCTGAAAA TTTAGCACAA ACATTAGCTA CTAGAGATGT GGAAGCAAGA TTAGCCACTG TATTAATAGA ATTTATGAAT AAGTATGGTG AGAAAAATAA AGAAGGAATA TACATAAGTT TACCTCTAAA TAGAGAACAG ATAGCAAATT ATTGTGGTAT AACAAGAGAA ACTGTAAGTA GAAGACTTTC AAAATTTGAT AAGTTAGGAA TAATAAAGTT ACAGGGGAAT AAGGGTCTTA TTGTTAAGGA CAAAGAAGCT TTATTTAGTT TAGCTGAATA G
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Protein sequence | MEKTCTCGSC KELCAKNISI FSTLSNEELL KIVNMTEHKS FKENDVLCRE GEKSDKLFLI REGRVKICKI TKEGKEQIVY VLSKGDFFGE NNLFTSNNIS NFSAYAITDA KLCILKKENL EKILIKNPEI SLKIIQEMAD RINSAENLAQ TLATRDVEAR LATVLIEFMN KYGEKNKEGI YISLPLNREQ IANYCGITRE TVSRRLSKFD KLGIIKLQGN KGLIVKDKEA LFSLAE
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