| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2804 |
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| Symbol | spoVB |
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| ID | 4203213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3061414 |
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| End bp | 3062946 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083672 |
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| Product | stage V sporulation protein B |
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| Protein accession | YP_697169 |
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| Protein GI | 110799918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AATCCCTTAT AAAAGGTAGT CTTGTACTTG CTTGTGCTGG TATTTTAGCC
AAGTTTCTTG GTTTATTTTT TAGATGGCCA TTAATAATGT TAATAGGAGA TGAAGGTTTA
GGATATTATC AAATGACCTA TCCTTTATAT ATGCTTTTTG TTGCCATTGC AGCAGGTATA
CCTATAGCAG TATCTAAATT AGTATCTGAA AAAAATGCTC TAGGAAAGTA TGAGGAAAGT
TTTCAGGTAA TAAAAGAAGC TTTAAAGGTA ATGGTTTTAC TAGGAATAGG GACAAGCATC
TTTTTAGCTG TAGGTGGTAA ATTTCTTTTA CCGTTTTTAA AATGGGATGA TAAGGCCTAT
TATTCTATAC TAGGAATTTG TTTAGCTCCT ACATTAATAG GAATAATAAC CCCTATTAGA
GGTTTTTTTC AAGGATTTCA GAATATGACT CCAACTGCTA TATCTCAAAT ACTAGAGCAA
ATAGGTAGAG TTATAGTTGG TGTTGGATTA GCTTATATAT TGATAGATAA AGGAATTGAA
TACTCAGCAG GGGGAGCATC CTTTGGAGCA GTAGCTGGAG CCTTTGTAGC AGCCTTATAT
TTAATTCCTA AATATAGAAA GATAAAAAAT AGTTTTAAAC TAGGTAAGAT AAAAGGTAGT
CATAAAATAT TTATGGAAAT AATAAATATA GCTCTTCCTA TATCTATAGG GGCTGCCGTA
GGAAGTGTTA TGGGGGTTAT AGATTCTGTC TTAGTTCCTC AAAAGCTTTT ACAAGCTGGG
TTTACTGGGC AAGAGGCTAC AGTTTTATAT GCTCAGCTTA CAGGGAAAGC TACTGTGTTT
ACTAATATTC CTATGACCTT AGCCACTGCA TTAGCTGCCT CAATAATACC TATAATTTCT
GAATTATATA TTCTTAAAGA TAAAGTACAA GTTAAACAAA AAATAGATAC TACAATGAAA
TTATGTATGA TAGTTTCTAT TCCATGTTTT TTAGGTTTAT TTTTTATGGC AGAACCTATA
ATGAATCTTT TATTTCCAGG AAAAGCTGAT GGATTTATGA TATTAAAATA TTTATCAATT
AGTGTTCCAT TTTTAGTTGG GACGCAGATA ACAACATCCA TATTACAAGG AATGGGATAT
TATTATAGAC CTGTTTTTCA TCTTTTTATA GGGTGTATAT TAAAAGTGGT ATTAACTATG
AATTTAATAC CTATAAGATC TTTAAACATT TATGGTGCTG TAATAGCAAC AATAATATCT
TATTCTGTGG TATTAATATT AAATTTAATA TATATGGCTA AGAGATTTAA ATATGCTCCA
AATATAAAAG ATGTAATAAT AAAGCCTATC TTCGCATCAA TTTTAATGAT TGGTACAGTT
TTATATTTAT ATACACAAGC TTTAAAATAT AGCGGAAGTA ACAGTATATC TTGCTTAATA
GCTGTATTTG TGGGTATTAT TATATATATG ATATCATTGT TTGTACTTAA AATTTTTAGC
GTAGAAGAAA TAAAGGGACG GCTAAGAAAT TAA
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| Protein sequence | MKKQSLIKGS LVLACAGILA KFLGLFFRWP LIMLIGDEGL GYYQMTYPLY MLFVAIAAGI
PIAVSKLVSE KNALGKYEES FQVIKEALKV MVLLGIGTSI FLAVGGKFLL PFLKWDDKAY
YSILGICLAP TLIGIITPIR GFFQGFQNMT PTAISQILEQ IGRVIVGVGL AYILIDKGIE
YSAGGASFGA VAGAFVAALY LIPKYRKIKN SFKLGKIKGS HKIFMEIINI ALPISIGAAV
GSVMGVIDSV LVPQKLLQAG FTGQEATVLY AQLTGKATVF TNIPMTLATA LAASIIPIIS
ELYILKDKVQ VKQKIDTTMK LCMIVSIPCF LGLFFMAEPI MNLLFPGKAD GFMILKYLSI
SVPFLVGTQI TTSILQGMGY YYRPVFHLFI GCILKVVLTM NLIPIRSLNI YGAVIATIIS
YSVVLILNLI YMAKRFKYAP NIKDVIIKPI FASILMIGTV LYLYTQALKY SGSNSISCLI
AVFVGIIIYM ISLFVLKIFS VEEIKGRLRN
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